RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 OR6V1Q8N148 313 aa10□□□□□ -0.81
UBR1-206ENST00000566493 PARP8Q8N3A8 854 aa10□□□□□ -0.81
UBR1-206ENST00000566493 RNF148Q8N7C7 305 aa10□□□□□ -0.81
UBR1-206ENST00000566493 SLC26A10Q8NG04 563 aa10□□□□□ -0.81
UBR1-206ENST00000566493 OR4K13Q8NH42 304 aa10□□□□□ -0.81
UBR1-206ENST00000566493 SPRYD4Q8WW59 207 aaPredicted RBP10□□□□□ -0.81
UBR1-206ENST00000566493 RAB40AQ8WXH6 277 aa10□□□□□ -0.81
UBR1-206ENST00000566493 PYURFQ96I23 114 aa10□□□□□ -0.81
UBR1-206ENST00000566493 DHRS1Q96LJ7 313 aa10□□□□□ -0.81
UBR1-206ENST00000566493 NMNAT3Q96T66 252 aa10□□□□□ -0.81
UBR1-206ENST00000566493 ATF6BQ99941 703 aa10□□□□□ -0.81
UBR1-206ENST00000566493 TMEM246Q9BRR3 403 aa10□□□□□ -0.81
UBR1-206ENST00000566493 C1QTNF5Q9BXJ0 243 aa10□□□□□ -0.81
UBR1-206ENST00000566493 GORASP2Q9H8Y8 452 aa10□□□□□ -0.81
UBR1-206ENST00000566493 RPRD1BQ9NQG5 326 aaKnown RBP10□□□□□ -0.81
UBR1-206ENST00000566493 ZNF446Q9NWS9 450 aa10□□□□□ -0.81
UBR1-206ENST00000566493 TMCC3Q9ULS5 477 aa10□□□□□ -0.81
UBR1-206ENST00000566493 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 IGHV2-70DA0A0C4DH43 119 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 ARPC3O15145 178 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 IDH3BO43837 385 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 FSTL3O95633 263 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 HLA-DPB1P04440 258 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 RNASE1P07998 156 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 ACSM4P0C7M7 580 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 HIST1H1CP16403 213 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 ZNF823P16415 610 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 PRDX6P30041 224 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 PITPNBP48739 271 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 RAD23AP54725 363 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 TPTEP56180 551 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 GK2Q14410 553 aaPredicted RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 ZNF404Q494X3 552 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 SLC18B1Q6NT16 456 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 CFAP77Q6ZQR2 320 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 COLCA1Q6ZS62 124 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 PGAP1Q75T13 922 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 MRPL21Q7Z2W9 205 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 ZBTB46Q86UZ6 589 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 FAM86B1Q8N7N1 296 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 SPTSSAQ969W0 71 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 ERGIC1Q969X5 290 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 SLCO4A1Q96BD0 722 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 ELAC2Q9BQ52 826 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 FUZQ9BT04 418 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 NSRP1Q9H0G5 558 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 MED4Q9NPJ6 270 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 MAGEL2Q9UJ55 1249 aa9.99□□□□□ -0.81
UBR1-206ENST00000566493 NOP16Q9Y3C1 178 aaKnown RBP9.99□□□□□ -0.81
UBR1-206ENST00000566493 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 KIR2DS1A0A191URI9 304 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 CLDN34H7C241 214 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 FABP3P05413 133 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 IL13RA1P78552 427 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 PAX2Q02962 417 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 TRAP1Q12931 704 aaKnown RBP9.98□□□□□ -0.81
UBR1-206ENST00000566493 KCNJ8Q15842 424 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 RSPO1Q2MKA7 263 aaPredicted RBP9.98□□□□□ -0.81
UBR1-206ENST00000566493 KRTAP27-1Q3LI81 207 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 DCDC5Q6ZRR9 648 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 CELF2-AS1Q8N7Q2 184 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 SDR9C7Q8NEX9 313 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 GNPDA2Q8TDQ7 276 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 UPRTQ96BW1 309 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 NSMCE2Q96MF7 247 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
UBR1-206ENST00000566493 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
UBR1-206ENST00000566493 SLC22A4Q9H015 551 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 MYLK2Q9H1R3 596 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 FN3KQ9H479 309 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 UNKLQ9H9P5 680 aaKnown RBP9.98□□□□□ -0.81
UBR1-206ENST00000566493 CYB5R1Q9UHQ9 305 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 KCNG2Q9UJ96 466 aa9.98□□□□□ -0.81
UBR1-206ENST00000566493 TRAV40A0A0B4J280 105 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 OR6C68A6NDL8 312 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 TMPRSS2O15393 492 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 RRM2P31350 389 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 GGT2P36268 569 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 PMELP40967 661 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 CD200P41217 278 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 GATA4P43694 442 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBR1-206ENST00000566493 SLC9A3R2Q15599 337 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 OR8G1Q15617 311 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 SAMD4BQ5PRF9 694 aaKnown RBP9.97□□□□□ -0.81
UBR1-206ENST00000566493 FAM201AQ5SY85 155 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 SLC35F1Q5T1Q4 408 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 NAA40Q86UY6 237 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 OR52L1Q8NGH7 329 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 Q8TCH9 128 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 C1orf147Q96MC9 270 aaPredicted RBP9.97□□□□□ -0.81
UBR1-206ENST00000566493 ZNF696Q9H7X3 374 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 UFSP2Q9NUQ7 469 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 KIF17Q9P2E2 1029 aa9.97□□□□□ -0.81
UBR1-206ENST00000566493 GGT3PA6NGU5 568 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms