RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 WARSP23381 471 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 OMGP23515 440 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 BMI1P35226 326 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 NUP62P37198 522 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 CYB561P49447 251 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF138P52744 262 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 QPRTQ15274 297 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 GABRA6Q16445 453 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 HNRNPA1L2Q32P51 320 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 HSP90AA4PQ58FG1 418 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 PIGGQ5H8A4 983 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ADNP2Q6IQ32 1131 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ULK3Q6PHR2 472 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF429Q86V71 674 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 PDCL2Q8N4E4 241 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 TMEM104Q8NE00 496 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 OR51G1Q8NGK1 321 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 MITD1Q8WV92 249 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ISOC2Q96AB3 205 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 CFAP53Q96M91 514 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 CD209Q9NNX6 404 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 RPS6KB2Q9UBS0 482 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 PSG8Q9UQ74 426 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 COMMD3-BMI1R4GMX3 469 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ADGRA3Q8IWK6 1321 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF142P52746 1687 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 MEGF6O75095 1541 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 DLC1Q96QB1 1528 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 ADGRB1O14514 1584 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 TRAV6A0A075B6T7 132 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 A6NDN8 102 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 FAM166BA8MTA8 275 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 TRIM49D1C9J1S8 452 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 PANO1I0J062 215 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 NME4O00746 187 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 CD5LO43866 347 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 OXTP01178 125 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 PCCAP05165 728 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 RAB4AP20338 218 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 PMCHP20382 165 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 GABRR2P28476 465 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 CFHR2P36980 270 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 RPS10P46783 165 aaKnown RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 SERPINB8P50452 374 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 ETV1P50549 477 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 HERVK_113P61574 105 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 TMED1Q13445 227 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 HES5Q5TA89 166 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 DNAJC24Q6P3W2 148 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 VKORC1L1Q8N0U8 176 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 CBR4Q8N4T8 237 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 TRAM1L1Q8N609 369 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 NPWQ8N729 165 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 FBXO36Q8NEA4 188 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 OR51L1Q8NGJ5 315 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 ITFG1Q8TB96 612 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 OR51E1Q8TCB6 317 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 SEH1LQ96EE3 360 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 LZTS2Q9BRK4 669 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 SLC25A2Q9BXI2 301 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 NAA50Q9GZZ1 169 aaKnown RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 LZTFL1Q9NQ48 299 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 MCUBQ9NWR8 336 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 ALKQ9UM73 1620 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 MAP3K15Q6ZN16 1313 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 DENND4AQ7Z401 1863 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 CPS1P31327 1500 aa3.39□□□□□ -1.87
CNOT1-209ENST00000566240 SETD1AO15047 1707 aaKnown RBP3.39□□□□□ -1.87
CNOT1-209ENST00000566240 RIMS2Q9UQ26 1411 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 IGHV3-64DA0A0J9YX35 117 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 RDH16O75452 317 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 TDP2O95551 362 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 SLC25A27O95847 323 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 HPRT1P00492 218 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 DCNP07585 359 aaKnown RBP3.38□□□□□ -1.87
CNOT1-209ENST00000566240 TPM1P09493 284 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 TACSTD2P09758 323 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 CCDC172P0C7W6 258 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 PTNP21246 168 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF136P52737 540 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF121P58317 390 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-209ENST00000566240 RCAN2Q14206 197 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 STK38Q15208 465 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 TSC22D1Q15714 1073 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 MPPED2Q15777 294 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 AADACL4Q5VUY2 407 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ABHD12BQ7Z5M8 362 aaPredicted RBP3.38□□□□□ -1.87
CNOT1-209ENST00000566240 HORMAD1Q86X24 394 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 FAM71AQ8IYT1 594 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 SNX31Q8N9S9 440 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 CHST4Q8NCG5 386 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 OR6Q1Q8NGQ2 317 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 RNF138Q8WVD3 245 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 RPEQ96AT9 228 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 NRBF2Q96F24 287 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 DYNLL2Q96FJ2 89 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms