RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 PTTG2Q9NZH5 202 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 LOC107986453A0A1B0GWG9 222 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 P2RY10O00398 339 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 CCL21O00585 134 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 ACSM4P0C7M7 580 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 ANOS1P23352 680 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 MAGEB1P43366 347 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 HGFACQ04756 655 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 FAM27D1Q5T7N8 215 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 DRAM2Q6UX65 266 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 PRSS45Q7RTY3 260 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 LIX1LQ8IVB5 337 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 C17orf78Q8N4C9 275 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 GPR148Q8TDV2 347 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 TRBV5-5A0A0J9YX44 114 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 ACOD1A6NK06 481 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 A8MXE2 369 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 ZNF879B4DU55 563 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 GATBO75879 557 aaKnown RBP26.61■■□□□ 1.85
CTCF-203ENST00000566078 OCM2P0CE71 109 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 COX5BP10606 129 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 ZNF182P17025 639 aaPredicted RBP26.61■■□□□ 1.85
CTCF-203ENST00000566078 IL32P24001 234 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 Q499Y3 187 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 PAMR1Q6UXH9 720 aa26.61■■□□□ 1.85
CTCF-203ENST00000566078 TSEN15Q8WW01 171 aaKnown RBP26.61■■□□□ 1.85
CTCF-203ENST00000566078 IQCMA0A1B0GVH7 501 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 ISG15P05161 165 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 ACHEP22303 614 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 CALRP27797 417 aaKnown RBP26.6■■□□□ 1.85
CTCF-203ENST00000566078 TMEM244Q5VVB8 128 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 STAC2Q6ZMT1 411 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 ZNF584Q8IVC4 421 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 PPIL3Q9H2H8 161 aaKnown RBP26.6■■□□□ 1.85
CTCF-203ENST00000566078 ZNF319Q9P2F9 582 aa26.6■■□□□ 1.85
CTCF-203ENST00000566078 LOC100509620A0A075B734 347 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 TBX1O43435 398 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 STOMP27105 288 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 SOX2P48431 317 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 UNQ9370/PRO34162Q6UXP9 181 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 WDR31Q8NA23 367 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 DYNC2LI1Q8TCX1 351 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 HHLA2Q9UM44 414 aa26.59■■□□□ 1.85
CTCF-203ENST00000566078 A0A1W2PPK0 400 aa26.58■■□□□ 1.85
CTCF-203ENST00000566078 CDRT1O95170 752 aa26.58■■□□□ 1.85
CTCF-203ENST00000566078 OR51E1Q8TCB6 317 aa26.58■■□□□ 1.85
CTCF-203ENST00000566078 DERL3Q96Q80 235 aa26.58■■□□□ 1.85
CTCF-203ENST00000566078 NBASA2RRP1 2371 aa26.58■■□□□ 1.85
CTCF-203ENST00000566078 MAPK3P27361 379 aaPredicted RBP26.57■■□□□ 1.84
CTCF-203ENST00000566078 GFOD2Q3B7J2 385 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 COMMD2Q86X83 199 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 MS4A3Q96HJ5 214 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 ZNF75AQ96N20 296 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 NOX4Q9NPH5 578 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 JKAMPQ9P055 326 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 C5orf49A4QMS7 147 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 C5orf63A6NC05 138 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 UCHL1P09936 223 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 CCL2P13500 99 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 PSMB1P20618 241 aaKnown RBP26.57■■□□□ 1.84
CTCF-203ENST00000566078 CCNOP22674 350 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 SDC2P34741 201 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 APLNRP35414 380 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 MXD1Q05195 221 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 KCNS3Q9BQ31 491 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 DHDHQ9UQ10 334 aa26.57■■□□□ 1.84
CTCF-203ENST00000566078 SHISA3A0PJX4 238 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 OR5H1A6NKK0 313 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 ARL6IP5O75915 188 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 LCATP04180 440 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 MYL9P24844 172 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 SNAI3Q3KNW1 292 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 FJX1Q86VR8 437 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 OR13C3Q8NGS6 347 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 PHYHIPQ92561 330 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 POM121L2Q96KW2 1035 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 OR10A2Q9H208 303 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 SP140LQ9H930 580 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 OBP2BQ9NPH6 170 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 AMDHD2Q9Y303 409 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 ESPL1Q14674 2120 aa26.56■■□□□ 1.84
CTCF-203ENST00000566078 A0A1B0GVI7 797 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 AGFG2O95081 481 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 SERPINA5P05154 406 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 ZNF14P17017 642 aaPredicted RBP26.55■■□□□ 1.84
CTCF-203ENST00000566078 RPS19P39019 145 aaKnown RBP26.55■■□□□ 1.84
CTCF-203ENST00000566078 HSD17B12Q53GQ0 312 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 OR52H1Q8NGJ2 320 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 TMEM106AQ96A25 262 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 S100PBPQ96BU1 408 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 ORAI1Q96D31 301 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 GPR84Q9NQS5 396 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 SNTG1Q9NSN8 517 aa26.55■■□□□ 1.84
CTCF-203ENST00000566078 CASKO14936 926 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 PIN1P1O15428 100 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 SYT7O43581 403 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 CELA3BP08861 270 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 CLEC2LP0C7M8 214 aa26.54■■□□□ 1.84
CTCF-203ENST00000566078 IDH3GP51553 393 aaPredicted RBP26.54■■□□□ 1.84
CTCF-203ENST00000566078 SLC30A7Q8NEW0 376 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms