RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 GPR84Q9NQS5 396 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 C14orf119Q9NWQ9 140 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 STEAP1Q9UHE8 339 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 LHX6Q9UPM6 363 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 NCOA6Q14686 2063 aaPredicted RBP17.12■□□□□ 0.33
CLN6-205ENST00000564846 IGLV3-1P01715 115 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 IL7P13232 177 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 OR3A2P47893 321 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 DEFA1P59665 94 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 DEFA3P59666 94 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 TRIM16LQ309B1 348 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 KRTAP27-1Q3LI81 207 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 FBXW9Q5XUX1 488 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 GLT8D1Q68CQ7 371 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 FGD2Q7Z6J4 655 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 OR4M1Q8NGD0 313 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 OR52H1Q8NGJ2 320 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 WNT2BQ93097 391 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 ABHD17AQ96GS6 310 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 C12orf49Q9H741 205 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 ETV7Q9Y603 341 aa17.12■□□□□ 0.33
CLN6-205ENST00000564846 SPTBN2O15020 2390 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 DBHP09172 617 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 PATE4P0C8F1 98 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 BAK1Q16611 211 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 TBR1Q16650 682 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 PLEKHN1Q494U1 663 aaPredicted RBP17.11■□□□□ 0.33
CLN6-205ENST00000564846 NAA40Q86UY6 237 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 NKAIN3Q8N8D7 197 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 OR5D14Q8NGL3 314 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 OR1J2Q8NGS2 313 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 SLC7A6Q92536 515 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 SP140LQ9H930 580 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 PRSS50Q9UI38 385 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 ATPIF1Q9UII2 106 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 DCHS1Q96JQ0 3298 aa17.11■□□□□ 0.33
CLN6-205ENST00000564846 LMX1BO60663 402 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 CD37P11049 281 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 GNALP38405 381 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 DDOSTP39656 456 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 HTR5AP47898 357 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 PITPNBP48739 271 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 CLDN12P56749 244 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 P2RY14Q15391 338 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLN6-205ENST00000564846 C9orf135Q5VTT2 229 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 POC5Q8NA72 575 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 PLPP7Q8NBV4 271 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 CCDC54Q8NEL0 328 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 OR5M9Q8NGP3 310 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 AKR7LQ8NHP1 331 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 FGFBP3Q8TAT2 258 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 OR10A2Q9H208 303 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 OR5V1Q9UGF6 321 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 SLC17A2O00624 439 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 ZNF20P17024 532 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 MPGP29372 298 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 UCNP55089 124 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 TMPRSS3P57727 454 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 OR2A2Q6IF42 318 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 PYHIN1Q6K0P9 492 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 BAIAP2L2Q6UXY1 529 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 FAM214BQ7L5A3 538 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 Q8N402 240 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 SETD6Q8TBK2 473 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 FOXRED1Q96CU9 486 aaPredicted RBP17.1■□□□□ 0.33
CLN6-205ENST00000564846 ADAT3Q96EY9 351 aaPredicted RBP17.1■□□□□ 0.33
CLN6-205ENST00000564846 COX4I2Q96KJ9 171 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 RNF121Q9H920 327 aa17.1■□□□□ 0.33
CLN6-205ENST00000564846 CFAP47Q6ZTR5 3102 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 APC2O95996 2303 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 CSF3P09919 207 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 OCMP0CE72 109 aaPredicted RBP17.09■□□□□ 0.33
CLN6-205ENST00000564846 FOXG1P55316 489 aaPredicted RBP17.09■□□□□ 0.33
CLN6-205ENST00000564846 SCN1BQ07699 218 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 GUSBP1Q15486 140 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 RAB11BQ15907 218 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 GFOD2Q3B7J2 385 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 ACSF3Q4G176 576 aaPredicted RBP17.09■□□□□ 0.33
CLN6-205ENST00000564846 FAM166AQ6J272 317 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 PGAP1Q75T13 922 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 OR51A2Q8NGJ7 313 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 OR14K1Q8NGZ2 314 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 FAM71F1Q96KD3 344 aaPredicted RBP17.09■□□□□ 0.33
CLN6-205ENST00000564846 GPR137Q96N19 417 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 TMEM138Q9NPI0 162 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 ZNF224Q9NZL3 707 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 RABL2AQ9UBK7 228 aaPredicted RBP17.09■□□□□ 0.33
CLN6-205ENST00000564846 RABL2BQ9UNT1 228 aa17.09■□□□□ 0.33
CLN6-205ENST00000564846 A0A096LPE4 126 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 A0A0G2JMP0 313 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 A0A0X1KG70 313 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 A0A1W2PPZ6 126 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 E9PLN8 166 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 ZNHIT1O43257 154 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 PTTG1O95997 202 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 ITGA5P08648 1049 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 RAB3AP20336 220 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 ANOS1P23352 680 aa17.08■□□□□ 0.33
CLN6-205ENST00000564846 BDKRB2P30411 391 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms