RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MED28Q9H204 178 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TP63Q9H3D4 680 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 C1orf198Q9H425 327 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SH2D2AQ9NP31 389 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC39A1Q9NY26 324 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 STMN3Q9NZ72 180 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CYB5R1Q9UHQ9 305 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FBXL2Q9UKC9 423 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 OR52A1Q9UKL2 312 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A0A6YYH2 397 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 NSG1A0A0A6YYJ2 146 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 A6NJ64 397 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 AQP7P3A6NL99 342 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 C22orf46C9J442 243 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 GDF9O60383 454 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 EIF1BO60739 113 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PGA4P0DJD7 388 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PGA3P0DJD8 388 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF43P17038 809 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PSMB1P20618 241 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 STOMP27105 288 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FOLR3P41439 243 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SSR4P51571 173 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CLRN1P58418 232 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TAS2R20P59543 309 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FMODQ06828 376 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TNK1Q13470 666 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 KCNMB1Q16558 191 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 HIST3H3Q16695 136 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF528Q3MIS6 628 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 DCAF12Q5T6F0 453 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 OLFML2AQ68BL7 652 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FIP1L1Q6UN15 594 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 RPS19BP1Q86WX3 136 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 Q8N1Y9 231 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 NOXO1Q8NFA2 376 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 OR11G2Q8NGC1 345 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 C11orf40Q8WZ69 217 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PTX4Q96A99 478 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM3DQ96BQ1 224 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FOXN4Q96NZ1 517 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 OR5B2Q96R09 309 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SLA2Q9H6Q3 261 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 HRASLSQ9HDD0 168 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 MCUBQ9NWR8 336 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PTTG3PQ9NZH4 202 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TRAV6A0A075B6T7 132 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 IGKV1D-43A0A0B4J1Z2 117 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 hCG_1809904A0A1W2PP81 198 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A1W2PPE2 198 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 LOC390937A0A1W2PQ73 354 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A1W2PR64 198 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF726A6NNF4 738 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 PRR33A8MZF0 331 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SHISA8B8ZZ34 492 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 H7C417 338 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SULT2B1O00204 365 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 F2RL2O00254 374 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SULT1C2O00338 296 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 TERTO14746 1132 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 TRAF3IP2O43734 574 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 RBBP9O75884 186 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 TPOP07202 933 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 FAUP35544 74 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 MLF1P58340 268 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 H3F3AP84243 136 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 MFGE8Q08431 387 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SF3B4Q15427 424 aaKnown RBP eCLIP6.43□□□□□ -1.384e-9■■■■■ 31.2
HERPUD1-209ENST00000564678 INPP5JQ15735 1006 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 RAB11BQ15907 218 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 GSG1Q2KHT4 349 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 ODF4Q2M2E3 257 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 C2orf76Q3KRA6 126 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM176BQ3YBM2 270 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 BCL2L15Q5TBC7 163 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC25A47Q6Q0C1 308 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SERPINA12Q8IW75 414 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 IZUMO1Q8IYV9 350 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM156Q8N614 296 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 DNAAF1Q8NEP3 725 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 OR51D1Q8NGF3 324 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 OR6M1Q8NGM8 313 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 OR1J4Q8NGS1 313 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 PHF21AQ96BD5 680 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 SLAMF6Q96DU3 332 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 MED30Q96HR3 178 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 HYLS1Q96M11 299 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 EMC6Q9BV81 110 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 GON7Q9BXV9 100 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 CDCP1Q9H5V8 836 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 AUNIPQ9H7T9 357 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 MOB1AQ9H8S9 216 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 KLK11Q9UBX7 282 aa6.43□□□□□ -1.38
HERPUD1-209ENST00000564678 MTFP1Q9UDX5 166 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms