RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 KPNA2P52292 529 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 CXCR4P61073 352 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 RRAS2P62070 204 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 YWHAEP62258 255 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 GTF2BQ00403 316 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 NAAAQ02083 359 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 CHRNB3Q05901 458 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 SLAMF1Q13291 335 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ASAH1Q13510 395 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 DGCR6Q14129 220 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TFDP2Q14188 446 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 SGCAQ16586 387 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 MICAQ29983 383 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 HKDC1Q2TB90 917 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 RFX4Q33E94 735 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TIMM50Q3ZCQ8 353 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 LRRC37A5PQ49AS3 106 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ACSF3Q4G176 576 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 ZNF691Q5VV52 312 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 DMKNQ6E0U4 476 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 DNAJC24Q6P3W2 148 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FAM131AQ6UXB0 335 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ANGPTL8Q6UXH0 198 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 PAMR1Q6UXH9 720 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TMPRSS11AQ6ZMR5 421 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 RTL4Q6ZR62 310 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FAM183BPQ6ZVS7 135 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 PAQR9Q6ZVX9 377 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ZNF720Q7Z2F6 126 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 BNIPLQ7Z465 357 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 CACUL1Q86Y37 369 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 SVOPLQ8N434 492 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FADS6Q8N9I5 356 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 C19orf18Q8NEA5 215 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 BEST4Q8NFU0 473 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 CLHC1Q8NHS4 586 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FAM110BQ8TC76 370 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FCGR1BQ92637 280 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TMBIM1Q969X1 311 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 RAD51AP1Q96B01 352 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TMEM45BQ96B21 275 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 PINX1Q96BK5 328 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 TCEAL4Q96EI5 215 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 MRPL53Q96EL3 112 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 LINC00052Q96N35 136 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ALKBH3Q96Q83 286 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 MBOAT4Q96T53 435 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 VAT1Q99536 393 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 C11orf70Q9BRQ4 267 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 TPPP3Q9BW30 176 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ZNF436Q9C0F3 470 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 ELOVL4Q9GZR5 314 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 OR51M1Q9H341 326 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 IL1RL2Q9HB29 575 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 NMUR1Q9HB89 426 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 NMRAL1Q9HBL8 299 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 POPDC2Q9HBU9 364 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 EML4Q9HC35 981 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 ACOT13Q9NPJ3 140 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ZNF275Q9NSD4 429 aaPredicted RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 CENPMQ9NSP4 180 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 SDHAF2Q9NX18 166 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 IMPAD1Q9NX62 359 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 PTTG3PQ9NZH4 202 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 CCDC167Q9P0B6 97 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 DEC1Q9P2X7 70 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 PHF11Q9UIL8 331 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 MRTO4Q9UKD2 239 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 CDH9Q9ULB4 789 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 MMP17Q9ULZ9 603 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 MGAT4AQ9UM21 535 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 RNF6Q9Y252 685 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 NEUROG3Q9Y4Z2 214 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 OR1A2Q9Y585 309 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 ALG5Q9Y673 324 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 FASNP49327 2511 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 MYO18AQ92614 2054 aaKnown RBP3.02□□□□□ -1.93
CHD9-212ENST00000564641 CACNA1EQ15878 2313 aa3.02□□□□□ -1.93
CHD9-212ENST00000564641 GOLGA4Q13439 2230 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 ASCC3Q8N3C0 2202 aaKnown RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 LOC100506127A0A0U1RQW1 187 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 A0A1B0GTQ1 180 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 FAM240BA0A1B0GVZ2 78 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 A0A1B0GW55 424 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 TRABD2BA6NFA1 517 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 FABP12A6NFH5 140 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 MFSD2BA6NFX1 497 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 YJEFN3A6XGL0 299 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 F8VP50 259 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 INMT-MINDY4F8WBC2 141 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SMLR1H3BR10 107 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 APOC4-APOC2K7ER74 178 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 WWP2O00308 870 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 KPNA3O00505 521 aaPredicted RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 PIRO00625 290 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 NME4O00746 187 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SDHDO14521 159 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 PRMT5O14744 637 aaPredicted RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 BCKDKO14874 412 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms