RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 RNASE10Q5GAN6 216 aaKnown RBP4.17□□□□□ -1.74
SMG1-207ENST00000563235 ZBTB8OSQ8IWT0 167 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 ATPAF2Q8N5M1 289 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 C16orf52Q8NHV5 167 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 SLC7A13Q8TCU3 470 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 TRUB1Q8WWH5 349 aaKnown RBP4.17□□□□□ -1.74
SMG1-207ENST00000563235 GHSRQ92847 366 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 MS4A8Q9BY19 250 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 NOX4Q9NPH5 578 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 RASL12Q9NYN1 266 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
SMG1-207ENST00000563235 A0A0D9SFI3 127 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MEGF11A6BM72 1044 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CXorf65A6NEN9 183 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 ADARB2-AS1A8MUL3 147 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 TAPBPO15533 448 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 UGT2B11O75310 529 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 TRAPPC6AO75865 159 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 LRATO95237 230 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 APRTP07741 180 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MBL2P11226 248 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 GABRA1P14867 456 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 PGCP20142 388 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 PAX6P26367 422 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 GCAP28676 217 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 IFNGR2P38484 337 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 AVPR1BP47901 424 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 PSMD8P48556 350 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 VAMP7P51809 220 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MAZP56270 477 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 TAS2R31P59538 309 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 RRAS2P62070 204 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 PIGFQ07326 219 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 PLA2G7Q13093 441 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 HNRNPA0Q13151 305 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 ITPK1Q13572 414 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZNF585BQ52M93 769 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 LCN10Q6JVE6 187 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 TMEM65Q6PI78 240 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 LINC00299Q6ZSB3 139 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 GLT6D1Q7Z4J2 308 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 DND1Q8IYX4 353 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 DHRSXQ8N5I4 330 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 KLHDC1Q8N7A1 406 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 SPATA22Q8NHS9 363 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 FAM45AQ8TCE6 357 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CASTOR1Q8WTX7 329 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 Q8WTZ3 238 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 FKBP10Q96AY3 582 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 NUS1Q96E22 293 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 OR8B4Q96RC9 309 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 TMEM121Q9BTD3 319 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CCDC32Q9BV29 185 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MAP1LC3AQ9H492 121 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 RBM7Q9Y580 266 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 MON2Q7Z3U7 1717 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZC3H12DA2A288 527 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 MSTNO14793 375 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 PHF1O43189 567 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 CHST10O43529 356 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CATP04040 527 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 SERPINA7P05543 415 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MATN1P21941 496 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CASP1P29466 404 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 GZMKP49863 264 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 RPS4XP62701 263 aaKnown RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 KLF5Q13887 457 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZNF169Q14929 603 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 VWA2Q5GFL6 755 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CPTPQ5TA50 214 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 NANOGP8Q6NSW7 305 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 LARP4Q71RC2 724 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMG1-207ENST00000563235 SLC35F2Q8IXU6 374 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CADM2Q8N3J6 435 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 OR4K1Q8NGD4 311 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 OR5J2Q8NH18 312 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 RAB3CQ96E17 227 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZNF837Q96EG3 531 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZNF503Q96F45 646 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 CPVLQ9H3G5 476 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 ZBTB20Q9HC78 741 aaPredicted RBP4.16□□□□□ -1.74
SMG1-207ENST00000563235 GALNT9Q9HCQ5 603 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 HMG20AQ9NP66 347 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MYH4Q9Y623 1939 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 MYH10P35580 1976 aa4.16□□□□□ -1.74
SMG1-207ENST00000563235 C5orf58C9J3I9 102 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SH2D1BO14796 132 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 B4GALT3O60512 393 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 TTLL1O95922 423 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 PDYNP01213 254 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 RPLP0P05388 317 aaKnown RBP4.15□□□□□ -1.74
SMG1-207ENST00000563235 SPI1P17947 270 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 LEPP41159 167 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 APOBEC1P41238 236 aaKnown RBP4.15□□□□□ -1.74
SMG1-207ENST00000563235 XCR1P46094 333 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 GCLMP48507 274 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 CDKN2DP55273 166 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 DOC2BQ14184 412 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 RNF212Q495C1 297 aa4.15□□□□□ -1.74
SMG1-207ENST00000563235 SPDYE7PQ495Y7 208 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms