RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 F5H5K5 113 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 ERVH48-1M5A8F1 160 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 P2RY10O00398 339 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 PIN1P1O15428 100 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 SYT7O43581 403 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 CGAP01215 116 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 GLI4P10075 376 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 SRMP19623 302 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 IGHV1-2P23083 117 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 HOXC12P31275 282 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 SOX2P48431 317 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 PSMD7P51665 324 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 FOXF2Q12947 444 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 PRR30Q53SZ7 412 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-205ENST00000562310 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 DOK3Q7L591 496 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 DOLPP1Q86YN1 238 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 RDH10Q8IZV5 341 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 FGFBP3Q8TAT2 258 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 ZFAND2BQ8WV99 257 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 HMG20AQ9NP66 347 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 OBP2BQ9NPH6 170 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 PLEKHB1Q9UF11 243 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-205ENST00000562310 LOC400499M0QZD8 3231 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
COMMD4-205ENST00000562310 CIB4A0PJX0 185 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 NOTOA8MTQ0 251 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 TOXO94900 526 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 HLA-HP01893 362 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 PATE4P0C8F1 98 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 CD79AP11912 226 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 PAX7P23759 505 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 OPRM1P35372 400 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 UBE2NP61088 152 aaKnown RBP12.46□□□□□ -0.41
COMMD4-205ENST00000562310 GSG1Q2KHT4 349 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 SFXN4Q6P4A7 337 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 MZT2AQ6P582 158 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 GABRG1Q8N1C3 465 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 ZNF433Q8N7K0 673 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-205ENST00000562310 OR51A4Q8NGJ6 313 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
COMMD4-205ENST00000562310 PIGMQ9H3S5 423 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 RGCCQ9H4X1 137 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 FOXJ3Q9UPW0 622 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 MGAQ8IWI9 3026 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 DMXL2Q8TDJ6 3036 aa12.46□□□□□ -0.41
COMMD4-205ENST00000562310 INTS1Q8N201 2190 aaKnown RBP12.46□□□□□ -0.42
COMMD4-205ENST00000562310 ZFYVE26Q68DK2 2539 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 A0A1B0GTI1 187 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 A0A1W2PPK0 400 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 IGLV3-1P01715 115 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 SLC2A1P11166 492 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 PEX19P40855 299 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 CASP6P55212 293 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 RAB1AP62820 205 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 GABRA6Q16445 453 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 RSPO1Q2MKA7 263 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-205ENST00000562310 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 STAC2Q6ZMT1 411 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 OR51E1Q8TCB6 317 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 ITFG2Q969R8 447 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 WBP1Q96G27 269 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
COMMD4-205ENST00000562310 GPR84Q9NQS5 396 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF275Q9NSD4 429 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-205ENST00000562310 B3GNT2Q9NY97 397 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 ASPMQ8IZT6 3477 aa12.45□□□□□ -0.42
COMMD4-205ENST00000562310 A0A0G2JK05 382 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 SMIM30A4D0T7 59 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 MEGF11A6BM72 1044 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 ANXA2P2A6NMY6 339 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 DHRS7CA6NNS2 312 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 CLDN25C9JDP6 229 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 MSTNO14793 375 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 TBX1O43435 398 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 XRCC2O43543 280 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
COMMD4-205ENST00000562310 RAD51DO75771 328 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 NCR1O76036 304 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 DBHP09172 617 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 INHBBP09529 407 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF20P17024 532 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 APEX1P27695 318 aaKnown RBP12.44□□□□□ -0.42
COMMD4-205ENST00000562310 BMXP51813 675 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 PPP3R1P63098 170 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 ZNF846Q147U1 533 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 CEP78Q5JTW2 689 aa12.44□□□□□ -0.42
COMMD4-205ENST00000562310 SFRP5Q5T4F7 317 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms