RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SLC37A3Q8NCC5 494 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 PROKR2Q8NFJ6 384 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 OR52L1Q8NGH7 329 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 OR51L1Q8NGJ5 315 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 OR8D4Q8NGM9 314 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 ZNF420Q8TAQ5 688 aaPredicted RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 NANPQ8TBE9 248 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 ZNF418Q8TF45 676 aaPredicted RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 HCAR1Q9BXC0 346 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 MAGIXQ9H6Y5 334 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 PATZ1Q9HBE1 687 aaKnown RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 MMP26Q9NRE1 261 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 TMEM100Q9NV29 134 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 VNN3Q9NY84 501 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 PPIAL4EA0A075B759 164 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 PPIAL4CA0A0B4J2A2 164 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 F5H0A9 414 aaPredicted RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 PPIAL4DF5H284 164 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 IFNL4K9M1U5 179 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 ZNF205O95201 554 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 CYB5R3P00387 301 aaPredicted RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 HLA-DPB1P04440 258 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 PPIAL4FP0DN26 164 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 PSKH1P11801 424 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 SELEP16581 610 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 PMELP40967 661 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 SRP9P49458 86 aaKnown RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 TPTEP56180 551 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 MALLQ13021 153 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 MICAQ29983 383 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 LCN8Q6JVE9 175 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 MOGAT3Q86VF5 341 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 LNX2Q8N448 690 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 OR10S1Q8NGN2 331 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 OR2T4Q8NH00 348 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 ZFAND2BQ8WV99 257 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 SLCO4A1Q96BD0 722 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 RBM4Q9BWF3 364 aaKnown RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 TSSK6Q9BXA6 273 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 MUC13Q9H3R2 512 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 TMEM165Q9HC07 324 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 TBC1D23Q9NUY8 699 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 KCNG2Q9UJ96 466 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 POLR3KQ9Y2Y1 108 aaPredicted RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 SAMHD1Q9Y3Z3 626 aaKnown RBP8.64□□□□□ -1.03
CLK3-205ENST00000561673 U3KQV3 271 aa8.64□□□□□ -1.03
CLK3-205ENST00000561673 CEACAM18A8MTB9 384 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 M0R135 149 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 ZNF593O00488 134 aaPredicted RBP8.63□□□□□ -1.03
CLK3-205ENST00000561673 SOX14O95416 240 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 FAM107AO95990 144 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 FSHBP01225 129 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 GYPBP06028 91 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 WNT2P09544 360 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 CALB2P22676 271 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 ANOS1P23352 680 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 HILS1P60008 231 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 ZNF154Q13106 437 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 MAB21L1Q13394 359 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 CRMP1Q14194 572 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 SNAI3Q3KNW1 292 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 FAM98BQ52LJ0 330 aaKnown RBP8.63□□□□□ -1.03
CLK3-205ENST00000561673 OR2T5Q6IEZ7 315 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 PGAP1Q75T13 922 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 DCXRQ7Z4W1 244 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 MUC20Q8N307 709 aaPredicted RBP8.63□□□□□ -1.03
CLK3-205ENST00000561673 CCDC197Q8NCU1 140 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 OR9Q1Q8NGQ5 310 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 OR2T29Q8NH02 315 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 OR4Q3Q8NH05 313 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 SPTSSAQ969W0 71 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 ZNF799Q96GE5 643 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 CLPTM1LQ96KA5 538 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 SLC6A7Q99884 636 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 DGCR6LQ9BY27 220 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 NMNAT2Q9BZQ4 307 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 REEP1Q9H902 201 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 DDX28Q9NUL7 540 aaKnown RBP8.63□□□□□ -1.03
CLK3-205ENST00000561673 ARMC1Q9NVT9 282 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 DYSFO75923 2080 aa8.63□□□□□ -1.03
CLK3-205ENST00000561673 C5orf63A6NC05 138 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 LRRC30A6NM36 301 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 A8MXK9 166 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 CLUP10909 449 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 ZNF12P17014 697 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 SPI1P17947 270 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 FMO3P31513 532 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 OTX1P32242 354 aaPredicted RBP8.62□□□□□ -1.03
CLK3-205ENST00000561673 GATA4P43694 442 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 SLC25A1P53007 311 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 ZNF92Q03936 586 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 PCK2Q16822 640 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 ZNF181Q2M3W8 571 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 ESCO2Q56NI9 601 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 FAM201AQ5SY85 155 aa8.62□□□□□ -1.03
CLK3-205ENST00000561673 CELF2-AS1Q8N7Q2 184 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms