RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SETD2Q9BYW2 2564 aaPredicted RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 LRRK2Q5S007 2527 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CREBBPQ92793 2442 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 hCG_1818297A0A087WSY0 165 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 IGKV3D-11A0A0A0MRZ8 115 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 E7ESA3 106 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 WWP2O00308 870 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 PSIP1O75475 530 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 F10P00742 488 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CRHP06850 196 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SLC35G6P0C7Q6 338 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 MPC1LP0DKB6 136 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 DBTP11182 482 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 TPSB2P20231 275 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 ZP3P21754 424 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 GCKP35557 465 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 HPCAL1P37235 193 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 FDFT1P37268 417 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 MEOX2P50222 304 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SSR4P51571 173 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 NUP107P57740 925 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CDK16Q00536 496 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 EWSR1Q01844 656 aaKnown RBP eCLIP2.78□□□□□ -1.96
HERC1-215ENST00000561436 RAB40BQ12829 278 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CDH17Q12864 832 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 GANABQ14697 944 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 PDK3Q15120 406 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 TPSAB1Q15661 275 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SYPL1Q16563 259 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 ZNF239Q16600 458 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 SFT2D3Q587I9 215 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 UTF1Q5T230 341 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 C1orf185Q5T7R7 199 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 LIPNQ5VXI9 398 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 PTRHD1Q6GMV3 140 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 FRMPD2BQ6IN97 320 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 UFSP1Q6NVU6 142 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 Q6ZR54 194 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 RTL4Q6ZR62 310 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SHISA6Q6ZSJ9 500 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 ABHD13Q7L211 337 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 TPRA1Q86W33 373 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 PIANPQ8IYJ0 282 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 TTLQ8NG68 377 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 OR8K1Q8NGG5 319 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 OR13F1Q8NGS4 319 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 OR13C4Q8NGS5 318 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 NT5CQ8TCD5 201 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 GTSF1Q8WW33 167 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 TCTEX1D2Q8WW35 142 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SLC5A11Q8WWX8 675 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 UCN3Q969E3 161 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 FGGYQ96C11 551 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 DNAJC1Q96KC8 554 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 CCDC42Q96M95 316 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CCDC77Q9BR77 488 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 C19orf24Q9BVV8 132 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 DEFB126Q9BYW3 111 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 UCK2Q9BZX2 261 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 CAB39LQ9H9S4 337 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 SPRR3Q9UBC9 169 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 PTBP2Q9UKA9 531 aaKnown RBP2.78□□□□□ -1.96
HERC1-215ENST00000561436 VSIG4Q9Y279 399 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 OTOGQ6ZRI0 2925 aa2.78□□□□□ -1.96
HERC1-215ENST00000561436 GOLGA4Q13439 2230 aaKnown RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 TLN1Q9Y490 2541 aaKnown RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 NUMA1Q14980 2115 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 IGLV8-61A0A075B6I0 122 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 TRGV5A0A0B4J1U4 118 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 IGKV1-8A0A0C4DH67 115 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 NKX2-6A6NCS4 301 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 H3BMQ9 156 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 H7C0C1 242 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 GFYI3L273 518 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 PSMD12O00232 456 aaPredicted RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 FCN1O00602 326 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 PHOX2AO14813 284 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SPOPO43791 374 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 DNAJB6O75190 326 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SERF1AO75920 110 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SNX4O95219 450 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 LY6G6DO95868 133 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 P04436 131 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 TPM1P09493 284 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CCDC166P0CW27 439 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 RNH1P13489 461 aaKnown RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 VDAC1P21796 283 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 IL2RGP31785 369 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ATP5OP48047 213 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 GBX2P52951 348 aaPredicted RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 DIO3P55073 304 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 PSPHP78330 225 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 MRPS11P82912 194 aaKnown RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 PLGLB1Q02325 96 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CHRNB3Q05901 458 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ST3GAL3Q11203 375 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 KIAA0040Q15053 153 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms