RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	HIST2H3PS2	Q5TEC6	136 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	TSPO2	Q5TGU0	170 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	FAM27B	Q5VT28	67 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	RPUSD3	Q6P087	351 aa	Known RBP	6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	XKRX	Q6PP77	449 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	KLHL24	Q6TFL4	600 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	HIST2H3A	Q71DI3	136 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	RHOU	Q7L0Q8	258 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	CCDC190	Q86UF4	302 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	TPRA1	Q86W33	373 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	NR2C2AP	Q86WQ0	139 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	TUSC5	Q8IXB3	177 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	GJC3	Q8NFK1	279 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	OR51A4	Q8NGJ6	313 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	OR10AC1	Q8NH08	325 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	GPR148	Q8TDV2	347 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	THRSP	Q92748	146 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	BORCS5	Q969J3	196 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	C14orf79	Q96F83	325 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	WDFY2	Q96P53	400 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	ATF6B	Q99941	703 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	SLX1A	Q9BQ83	275 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	NIPAL2	Q9H841	368 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	MOB1A	Q9H8S9	216 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	CALHM2	Q9HA72	323 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	PLGRKT	Q9HBL7	147 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	NOX4	Q9NPH5	578 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	G6PC2	Q9NQR9	355 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	CENPM	Q9NSP4	180 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	TMEM38B	Q9NVV0	291 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	FAM206A	Q9NX38	181 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	CLCF1	Q9UBD9	225 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	OR52A1	Q9UKL2	312 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	CLEC4A	Q9UMR7	237 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	GTF2A1L	Q9UNN4	478 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	SLC22A13	Q9Y226	551 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	EMC9	Q9Y3B6	208 aa		6.59	□□□□□ -1.35
TPM1-231	ENST00000561395	AKAP6	Q13023	2319 aa		6.59	□□□□□ -1.36
TPM1-231	ENST00000561395	TRGV8	A0A0C4DH27	118 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	TMEM269	A0A1B0GVZ9	245 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	LOC107986453	A0A1B0GWG9	222 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A1W2PPK0	400 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF587B	E7ETH6	402 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	C19orf84	I3L1E1	186 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395		J3QRK9	145 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	CTDSP2	O14595	271 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	PIN1P1	O15428	100 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	SS18L1	O75177	396 aa	Predicted RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	WISP2	O76076	250 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	ISG15	P05161	165 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	OCM2	P0CE71	109 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	UBC	P0CG48	685 aa	Known RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	B4GALT1	P15291	398 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	RAB3B	P20337	219 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	ACHE	P22303	614 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	HSD11B1	P28845	292 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	AGTR1	P30556	359 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	MAGEB1	P43366	347 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	OR10A3	P58181	314 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	GRB2	P62993	217 aa	Known RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	TLE4	Q04727	773 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	TAF13	Q15543	124 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	ODF4	Q2M2E3	257 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	NRN1L	Q496H8	165 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	DDI2	Q5TDH0	399 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	SFXN4	Q6P4A7	337 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF704	Q6ZNC4	412 aa	Predicted RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	NUFIP2	Q7Z417	695 aa	Known RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	CROCCP3	Q8IVE0	287 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	LAX1	Q8IWV1	398 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	RDH10	Q8IZV5	341 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	LRRC18	Q8N456	261 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC22A24	Q8N4F4	322 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	SARAF	Q96BY9	339 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	GMPPA	Q96IJ6	420 aa	Predicted RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	FOXB1	Q99853	325 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	PBOV1	Q9GZY1	135 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	MIXL1	Q9H2W2	232 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	PALMD	Q9NP74	551 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC7A10	Q9NS82	523 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	NUFIP1	Q9UHK0	495 aa	Known RBP	6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	CMAHP	Q9Y471	501 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	MED12L	Q86YW9	2145 aa		6.58	□□□□□ -1.36
TPM1-231	ENST00000561395	JMJD1C	Q15652	2540 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM221A	A4D161	298 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	OR14I1	A6ND48	311 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ANKRD61	A6NGH8	418 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	NOTO	A8MTQ0	251 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	PDCD5	O14737	125 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	RGS5	O15539	181 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	KRT33A	O76009	404 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	IGHV3-9	P01782	118 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	RAF1	P04049	648 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ACSM4	P0C7M7	580 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	SRM	P19623	302 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	FST	P19883	344 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	CTSS	P25774	331 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	OTX1	P32242	354 aa	Predicted RBP	6.57	□□□□□ -1.36

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