RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HAVCR1Q96D42 359 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 L3HYPDHQ96EM0 354 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 SLC25A44Q96H78 314 aaPredicted RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 MUC4Q99102 2169 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 DUSP26Q9BV47 211 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 DPH5Q9H2P9 285 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 POFUT1Q9H488 388 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 GSTO2Q9H4Y5 243 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 RMND5AQ9H871 391 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 SIAEQ9HAT2 523 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 UFSP2Q9NUQ7 469 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.25□□□□□ -1.73
HERC1-213ENST00000561359 FIS1Q9Y3D6 152 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 TRAV38-1A0A0B4J264 116 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 WDR91A4D1P6 747 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 H3BQF6 201 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 HMGN4O00479 90 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 EBAG9O00559 213 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 RNASET2O00584 256 aaKnown RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 PLPP3O14495 311 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 LSM1O15116 133 aaKnown RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 LYPLA1O75608 230 aaPredicted RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 IGHG1P01857 330 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 SLPIP03973 132 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 FRMD6-AS1P0C7T7 363 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 NR2F1P10589 423 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 PRPS1L1P21108 318 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 TUBG1P23258 451 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CDAP32320 146 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 THBS3P49746 956 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ERFP50548 548 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CLRN1P58418 232 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 BLCAPP62952 87 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 MELKQ14680 651 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 PTGR1Q14914 329 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 NPTX1Q15818 432 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 SGCAQ16586 387 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CFAP157Q5JU67 520 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 OR2T2Q6IF00 324 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 C1orf94Q6P1W5 598 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ZNF836Q6ZNA1 936 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 LRRC74BQ6ZQY2 392 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CLIP4Q8N3C7 705 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 Q8N7P7 452 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 BHLHE23Q8NDY6 225 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 OR8G5Q8NG78 346 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 OR52P1PQ8NH57 321 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 FAM81AQ8TBF8 368 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 LINC00476Q8WZB0 136 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 TNFRSF14Q92956 283 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 PTP4A1Q93096 173 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 MCHR2Q969V1 340 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ZNF503Q96F45 646 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 SLC41A3Q96GZ6 507 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 TEX37Q96LM6 180 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ZNF583Q96ND8 569 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ZNF582Q96NG8 517 aaPredicted RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 EPYCQ99645 322 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 OR2H1Q9GZK4 316 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 WNT5BQ9H1J7 359 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 ARMC7Q9H6L4 198 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 VIPAS39Q9H9C1 493 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CACYBPQ9HB71 228 aaKnown RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 TRIM36Q9NQ86 728 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 TUBG2Q9NRH3 451 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 MRPL39Q9NYK5 338 aaKnown RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 MARCOQ9UEW3 520 aaPredicted RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
HERC1-213ENST00000561359 STARD10Q9Y365 291 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 CAPN7Q9Y6W3 813 aa4.24□□□□□ -1.73
HERC1-213ENST00000561359 IGKV1D-42A0A075B6H8 117 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 OOEPA6NGQ2 149 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 MLNRO43193 412 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 RNF13O43567 381 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 FCN3O75636 299 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 CPSF4O95639 269 aaKnown RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 CHEK2O96017 543 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 BGLAPP02818 100 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 HLA-DPB1P04440 258 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 PGA4P0DJD7 388 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 PGA3P0DJD8 388 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ETFAP13804 333 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 RAB13P51153 203 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 MRPS25P82663 173 aaKnown RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 MRPS34P82930 218 aaKnown RBP4.23□□□□□ -1.73
HERC1-213ENST00000561359 IFFO1Q0D2I5 559 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ECH1Q13011 328 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 KLF10Q13118 480 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 FHL2Q14192 279 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 PLA1AQ53H76 456 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 CLEC12AQ5QGZ9 265 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 OR4F3Q6IEY1 312 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 ZNF662Q6ZS27 426 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 COLCA1Q6ZS62 124 aa4.23□□□□□ -1.73
HERC1-213ENST00000561359 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms