RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 C19orf18Q8NEA5 215 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 STON2Q8WXE9 905 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 ZBTB9Q96C00 473 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 PRRC1Q96M27 445 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 SH3GL1Q99961 368 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 ZNRD1Q9P1U0 126 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 KAAG1Q9UBP8 84 aa15.28■□□□□ 0.04
TPM1-226ENST00000560959 COA3Q9Y2R0 106 aaPredicted RBP15.28■□□□□ 0.04
TPM1-226ENST00000560959 A0A1B0GVI7 797 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 RNASEK-C17orf49H0YIS7 233 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 RPL4P36578 427 aaKnown RBP15.27■□□□□ 0.04
TPM1-226ENST00000560959 MPPED2Q15777 294 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 RSPO1Q2MKA7 263 aaPredicted RBP15.27■□□□□ 0.04
TPM1-226ENST00000560959 KRTAP27-1Q3LI81 207 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 NANOGP8Q6NSW7 305 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 BTN2A1Q7KYR7 527 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 CALHM3Q86XJ0 350 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 NRMQ8IXM6 262 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 OR5R1Q8NH85 324 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 Q96M85 177 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 NMNAT1Q9HAN9 279 aaPredicted RBP15.27■□□□□ 0.04
TPM1-226ENST00000560959 SMURF1Q9HCE7 757 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 UFSP2Q9NUQ7 469 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 VSX1Q9NZR4 365 aaPredicted RBP15.27■□□□□ 0.04
TPM1-226ENST00000560959 ADAM18Q9Y3Q7 739 aa15.27■□□□□ 0.04
TPM1-226ENST00000560959 OOEPA6NGQ2 149 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 SLC16A7O60669 478 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 CYLC2Q14093 348 aaPredicted RBP15.26■□□□□ 0.03
TPM1-226ENST00000560959 GK2Q14410 553 aaPredicted RBP15.26■□□□□ 0.03
TPM1-226ENST00000560959 ZBED5Q49AG3 693 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 BEND6Q5SZJ8 279 aaPredicted RBP15.26■□□□□ 0.03
TPM1-226ENST00000560959 PRAMEF6Q5VXH4 476 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 SFRP4Q6FHJ7 346 aaPredicted RBP15.26■□□□□ 0.03
TPM1-226ENST00000560959 SLC35E4Q6ICL7 350 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 ERICH5Q6P6B1 374 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 MICU2Q8IYU8 434 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 SPERTQ8NA61 448 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 MRAPQ8TCY5 172 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 TLCD1Q96CP7 247 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 ZNF570Q96NI8 536 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 NDEL1Q9GZM8 345 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.26■□□□□ 0.03
TPM1-226ENST00000560959 RAB21Q9UL25 225 aa15.26■□□□□ 0.03
TPM1-226ENST00000560959 GMDSO60547 372 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 GUCA2AQ02747 115 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 MALLQ13021 153 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 OR8B8Q15620 311 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 GPR139Q6DWJ6 353 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 TMPRSS11FQ6ZWK6 438 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 OFCC1Q8IZS5 231 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 LY6G5BQ8NDX9 201 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 OR13C2Q8NGS9 318 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 CFHR4Q92496 578 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 SYT4Q9H2B2 425 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 WDR76Q9H967 626 aa15.25■□□□□ 0.03
TPM1-226ENST00000560959 RPUSD1Q9UJJ7 312 aaKnown RBP15.25■□□□□ 0.03
TPM1-226ENST00000560959 TET2Q6N021 2002 aaPredicted RBP15.25■□□□□ 0.03
TPM1-226ENST00000560959 DNAH3Q8TD57 4116 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 DVL1O14640 695 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 PRB2P02812 416 aaPredicted RBP15.24■□□□□ 0.03
TPM1-226ENST00000560959 SDHAP31040 664 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 GABRA5P31644 462 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 SELENOWP63302 87 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 ECH1Q13011 328 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 TRAM2Q15035 370 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 OR8G1Q15617 311 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 PGAP1Q75T13 922 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 VMO1Q7Z5L0 202 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 ADCK1Q86TW2 530 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 OR8J3Q8NGG0 315 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 SPRYD4Q8WW59 207 aaPredicted RBP15.24■□□□□ 0.03
TPM1-226ENST00000560959 ACOT11Q8WXI4 607 aaPredicted RBP15.24■□□□□ 0.03
TPM1-226ENST00000560959 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 POLR1DQ9Y2S0 133 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 LHFPL6Q9Y693 200 aa15.24■□□□□ 0.03
TPM1-226ENST00000560959 PLXNB1O43157 2135 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 ANKRD61A6NGH8 418 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 CDC42EP2O14613 210 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 OR10H3O60404 316 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 FCN3O75636 299 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 LHBP01229 141 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 ACSM4P0C7M7 580 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 ZNF26P17031 533 aaPredicted RBP15.23■□□□□ 0.03
TPM1-226ENST00000560959 KDELR2P33947 212 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 KIR2DS4P43632 304 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 KRR1Q13601 381 aaKnown RBP15.23■□□□□ 0.03
TPM1-226ENST00000560959 CYBRD1Q53TN4 286 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 TEX36Q5VZQ5 186 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 MBOAT2Q6ZWT7 520 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 PDZD9Q8IXQ8 264 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 GPX7Q96SL4 187 aaPredicted RBP15.23■□□□□ 0.03
TPM1-226ENST00000560959 FNDC11Q9BVV2 318 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 NUAK2Q9H093 628 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 NRIP3Q9NQ35 241 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 NECAP2Q9NVZ3 263 aa15.23■□□□□ 0.03
TPM1-226ENST00000560959 A0A087WUU8 490 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 XPNPEP2O43895 674 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 NPPAP01160 153 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 GYPAP02724 150 aa15.22■□□□□ 0.03
TPM1-226ENST00000560959 EEF1B2P24534 225 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms