RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 LIPFP07098 398 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 TSPAN19P0C672 248 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 GPR4P46093 362 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 PROK1P58294 105 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 ARF6P62330 175 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 CYLC2Q14093 348 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 OR8G1Q15617 311 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 FAM189A2Q15884 450 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF181Q2M3W8 571 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 FBXW12Q6X9E4 464 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF730Q6ZMV8 503 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 CCDC80Q76M96 950 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 RRM2BQ7LG56 351 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 GLB1L2Q8IW92 636 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 DPP10Q8N608 796 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 SPRYD4Q8WW59 207 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 DACT3Q96B18 629 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 PRRC1Q96M27 445 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 Q96M85 177 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 TBX15Q96SF7 602 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 SIKE1Q9BRV8 207 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 FNDC11Q9BVV2 318 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 RASSF4Q9H2L5 321 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 RPS6KA6Q9UK32 745 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 COA3Q9Y2R0 106 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A0G2JND7 137 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 PRSS37A4D1T9 235 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 A6NLC8 198 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 IQCF6A8MYZ5 107 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 J3QW42 95 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 SOCS2O14508 198 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 SNX3O60493 162 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 CTLA4P16410 223 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 PMELP40967 661 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 CRYBA2P53672 197 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 HOXA4Q00056 320 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 EGR3Q06889 387 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 MALLQ13021 153 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 KRR1Q13601 381 aaKnown RBP8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 CCDC92Q53HC0 331 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 CYBRD1Q53TN4 286 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 MESTQ5EB52 335 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 RABL3Q5HYI8 236 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 Q6ZSV7 163 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 Q6ZTK2 550 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 MRPL21Q7Z2W9 205 aaKnown RBP8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 ST8SIA4Q92187 359 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 SYT4Q9H2B2 425 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 FN3KRPQ9HA64 309 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 ONECUT1Q9UBC0 465 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 RNF7Q9UBF6 113 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 DNAJB11Q9UBS4 358 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 ARL2BPQ9Y2Y0 163 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 CAB39Q9Y376 341 aaPredicted RBP8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
CDC42BPB-207ENST00000560492 TRAV38-1A0A0B4J264 116 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF816-ZNF321PA0A0X1KG74 233 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A1W2PRF3 423 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A1W2PRM7 423 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 HTR3EA5X5Y0 456 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 F5H5K5 113 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 PAHP00439 452 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 GYPAP02724 150 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 LCATP04180 440 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 CD14P08571 375 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 FBP1P09467 338 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 IER3P46695 156 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 LSM6P62312 80 aaKnown RBP8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 TRAM2Q15035 370 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 MPPED2Q15777 294 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 MEP1BQ16820 701 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ANKDD1AQ495B1 522 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 NANOGP8Q6NSW7 305 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ERICH5Q6P6B1 374 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 CORO6Q6QEF8 472 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF841Q6ZN19 808 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 PGAP1Q75T13 922 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 LNX2Q8N448 690 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 C11orf44Q8N8P7 122 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 LRRC75AQ8NAA5 344 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 GJC3Q8NFK1 279 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ERGIC1Q969X5 290 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 SLCO4A1Q96BD0 722 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF583Q96ND8 569 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 ADAT1Q9BUB4 502 aaKnown RBP8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 HDHD2Q9H0R4 259 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 SEMA6AQ9H2E6 1030 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 CTSZQ9UBR2 303 aa8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
CDC42BPB-207ENST00000560492 C5orf63A6NC05 138 aa8.67□□□□□ -1.02
CDC42BPB-207ENST00000560492 ERICH4A6NGS2 130 aa8.67□□□□□ -1.02
CDC42BPB-207ENST00000560492 J3KTA2 159 aa8.67□□□□□ -1.02
CDC42BPB-207ENST00000560492 LGALS8O00214 317 aa8.67□□□□□ -1.02
CDC42BPB-207ENST00000560492 EBAG9O00559 213 aa8.67□□□□□ -1.02
CDC42BPB-207ENST00000560492 OR10H3O60404 316 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms