RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 LYPD6Q86Y78 171 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SERPINA12Q8IW75 414 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 OR2H1Q9GZK4 316 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 GLRX2Q9NS18 164 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 RABL2AQ9UBK7 228 aaPredicted RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 E9PLN8 166 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 PDGFAP04085 211 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ITGA5P08648 1049 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 AGTR1P30556 359 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 MADCAM1Q13477 382 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF774Q6NX45 483 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 DRAM2Q6UX65 266 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 BAIAP2L2Q6UXY1 529 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 DOK3Q7L591 496 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 GDPD3Q7L5L3 318 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ABHD12BQ7Z5M8 362 aaPredicted RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 SPACA3Q8IXA5 215 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF100Q8IYN0 542 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 OR5D14Q8NGL3 314 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SLC7A6Q92536 515 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SARAFQ96BY9 339 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ADAT3Q96EY9 351 aaPredicted RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 PGAM5Q96HS1 289 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 ABHD1Q96SE0 405 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 WNT5BQ9H1J7 359 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 LOC390937A0A1W2PQ73 354 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 A6NIN4 97 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 SS18L1O75177 396 aaPredicted RBP11.1□□□□□ -0.63
USP3-213ENST00000559711 UBL3O95164 117 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 DBHP09172 617 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 PATE4P0C8F1 98 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 TPTEP56180 551 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 ASAH1Q13510 395 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 RAB11BQ15907 218 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 C1orf100Q5SVJ3 147 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 RPUSD3Q6P087 351 aaKnown RBP11.1□□□□□ -0.63
USP3-213ENST00000559711 RBMXL3Q8N7X1 1067 aaKnown RBP11.1□□□□□ -0.63
USP3-213ENST00000559711 NKAIN3Q8N8D7 197 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 CCDC54Q8NEL0 328 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 OR51A2Q8NGJ7 313 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 SLC25A28Q96A46 364 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 FOXRED1Q96CU9 486 aaPredicted RBP11.1□□□□□ -0.63
USP3-213ENST00000559711 ZNF224Q9NZL3 707 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 DKK4Q9UBT3 224 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 N6AMT1Q9Y5N5 214 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 DNAJC13O75165 2243 aa11.1□□□□□ -0.63
USP3-213ENST00000559711 FRYQ5TBA9 3013 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 ADRB1P08588 477 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 SLC6A9P48067 706 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 ART1P52961 327 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
USP3-213ENST00000559711 PITPNAQ00169 270 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 OR1M1Q8NGA1 313 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 OR52H1Q8NGJ2 320 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 OR14K1Q8NGZ2 314 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 AKR7LQ8NHP1 331 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 HAVCR1Q96D42 359 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 SOX7Q9BT81 388 aa11.09□□□□□ -0.63
USP3-213ENST00000559711 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
USP3-213ENST00000559711 OR14I1A6ND48 311 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 K7EM74 188 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 CTDSPLO15194 276 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 PLA2G10O15496 165 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 TPPPO94811 219 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 BDKRB2P30411 391 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 EIF2S3P41091 472 aaKnown RBP11.08□□□□□ -0.64
USP3-213ENST00000559711 OR3A2P47893 321 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 MMP15P51511 669 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 SPOCK1Q08629 439 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 FAPQ12884 760 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 SLC36A2Q495M3 483 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 TRIQKQ629K1 86 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 PGAP1Q75T13 922 aa11.08□□□□□ -0.64
USP3-213ENST00000559711 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms