RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DNAJB9Q9UBS3 223 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 TMEFF2Q9UIK5 374 aaPredicted RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 WIPI2Q9Y4P8 454 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 IGHV3-64DA0A0J9YX35 117 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 ZNF878C9JN71 531 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 TBX1O43435 398 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 CIB2O75838 187 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 MSMBP08118 114 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 CD55P08174 381 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 ADH4P08319 380 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 SLC2A1P11166 492 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PSKH1P11801 424 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OSMP13725 252 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 ANXA8P13928 327 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 HSD11B1P28845 292 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 GSTT1P30711 240 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 RAD23AP54725 363 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 RPS7P62081 194 aaKnown RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 HNRNPA0Q13151 305 aaKnown RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 KLHL12Q53G59 568 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 SPRNQ5BIV9 151 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 ZNF362Q5T0B9 420 aaPredicted RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 C1orf146Q5VVC0 180 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PLBD1Q6P4A8 553 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 CD300LDQ6UXZ3 194 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PGAP1Q75T13 922 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OR8G5Q8NG78 346 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OR10S1Q8NGN2 331 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OR13G1Q8NGZ3 307 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OR2AE1Q8NHA4 323 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 SPRYD4Q8WW59 207 aaPredicted RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 SLCO4A1Q96BD0 722 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 OR2V2Q96R30 315 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 DDOQ99489 341 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 C1QTNF5Q9BXJ0 243 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 NMNAT2Q9BZQ4 307 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PNRC2Q9NPJ4 139 aaKnown RBP6.94□□□□□ -1.3
SNX1-207ENST00000559401 DCAF16Q9NXF7 216 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 DNAJC27Q9NZQ0 273 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 IL19Q9UHD0 177 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PCDHB10Q9UN67 800 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 PPP1R3CQ9UQK1 317 aa6.94□□□□□ -1.3
SNX1-207ENST00000559401 GGT3PA6NGU5 568 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 IQCF6A8MYZ5 107 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 F5H5P2 479 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 H0YL77 283 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 GLCEO94923 617 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 HLA-DPB1P04440 258 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 HMGN1P05114 100 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 ANXA2P07355 339 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 SBK2P0C263 348 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 ANPEPP15144 967 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 RBMXP38159 391 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 NAA10P41227 235 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 SLC15A1P46059 708 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 SRP9P49458 86 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 LMO4P61968 165 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 GK2Q14410 553 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 OR8G1Q15617 311 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 GFOD2Q3B7J2 385 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 ACSM5Q6NUN0 579 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 FAHD2BQ6P2I3 314 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 DRAM2Q6UX65 266 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 DPY19L4Q7Z388 723 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 CPOQ8IVL8 374 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 PAPD5Q8NDF8 572 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 OR5K1Q8NHB7 308 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 ZNF420Q8TAQ5 688 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 ST7LQ8TDW4 575 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 TMEM186Q96B77 213 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 ZMYND19Q96E35 227 aaPredicted RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 FAHD2AQ96GK7 314 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 BRD7Q9NPI1 651 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 PAPOLBQ9NRJ5 636 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 KRT84Q9NSB2 600 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 DDX28Q9NUL7 540 aaKnown RBP6.93□□□□□ -1.3
SNX1-207ENST00000559401 TMEM106BQ9NUM4 274 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 TMEM100Q9NV29 134 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 NPTNQ9Y639 398 aa6.93□□□□□ -1.3
SNX1-207ENST00000559401 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 RNF212BA8MTL3 300 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 MLNRO43193 412 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 IGHV2-5P01817 119 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 H2BFMP0C1H6 154 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 IRF2P14316 349 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 FASP25445 335 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 CX3CR1P49238 355 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 MMP16P51512 607 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 GRB2P62993 217 aaKnown RBP6.92□□□□□ -1.3
SNX1-207ENST00000559401 LCN2P80188 198 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 ZNF92Q03936 586 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 SNAPC1Q16533 368 aa6.92□□□□□ -1.3
SNX1-207ENST00000559401 TIGD6Q17RP2 521 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms