RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TUBG1P23258 451 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 PCSK6P29122 969 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 CCKARP32238 428 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 KIR3DL2P43630 455 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 TUBA1BP68363 451 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 SLC3A1Q07837 685 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 MFGE8Q08431 387 aaPredicted RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 CLVS1Q8IUQ0 354 aaPredicted RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 ZNF676Q8N7Q3 588 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 ZFP41Q8N8Y5 198 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 RBM38Q9H0Z9 239 aaKnown RBP12.92□□□□□ -0.34
VPS18-202ENST00000558474 OR10A2Q9H208 303 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 NGBQ9NPG2 151 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 TUBG2Q9NRH3 451 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 CEPT1Q9Y6K0 416 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 MYO7BQ6PIF6 2116 aa12.92□□□□□ -0.34
VPS18-202ENST00000558474 KALRNO60229 2985 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 CACNA1CQ13936 2221 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 C5orf49A4QMS7 147 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 SC5DO75845 299 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 TTRP02766 147 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
VPS18-202ENST00000558474 DBHP09172 617 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 ACHEP22303 614 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 CFL1P23528 166 aaKnown RBP12.91□□□□□ -0.34
VPS18-202ENST00000558474 MAPK3P27361 379 aaPredicted RBP12.91□□□□□ -0.34
VPS18-202ENST00000558474 CRYBB2P43320 205 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 SLC6A9P48067 706 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 TAB1Q15750 504 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 GPR107Q5VW38 600 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 OR5L1Q8NGL2 311 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 ABHD4Q8TB40 342 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 ITLN2Q8WWU7 325 aaPredicted RBP12.91□□□□□ -0.34
VPS18-202ENST00000558474 APOBEC3DQ96AK3 386 aaPredicted RBP12.91□□□□□ -0.34
VPS18-202ENST00000558474 PGAM5Q96HS1 289 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 PDCD1LG2Q9BQ51 273 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 OPA3Q9H6K4 179 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 NDRG3Q9UGV2 375 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 GTF2A1LQ9UNN4 478 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 EPG5Q9HCE0 2579 aa12.91□□□□□ -0.34
VPS18-202ENST00000558474 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 DHRS7CA6NNS2 312 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 H3BSA7 217 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 XRCC2O43543 280 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 AIREO43918 545 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 RGS9O75916 674 aaPredicted RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 RAF1P04049 648 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 EPXP11678 715 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 CCL1P22362 96 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 GADD45AP24522 165 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 IDH3GP51553 393 aaPredicted RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 RPS25P62851 125 aaKnown RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 UNQ9370/PRO34162Q6UXP9 181 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 SLC16A12Q6ZSM3 486 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 Q6ZSR3 168 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 FAM57BQ71RH2 274 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 OR8B12Q8NGG6 310 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 SLC7A6Q92536 515 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 TMED9Q9BVK6 235 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 CDH20Q9HBT6 801 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 HHLA2Q9UM44 414 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 SLC22A13Q9Y226 551 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
VPS18-202ENST00000558474 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
VPS18-202ENST00000558474 IGHV1-18A0A0C4DH31 117 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 LOC390937A0A1W2PQ73 354 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 A0A1W2PR80 420 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
VPS18-202ENST00000558474 LCATP04180 440 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 ZNF35P13682 527 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 RPS11P62280 158 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS18-202ENST00000558474 TFF3Q07654 80 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 Q499Y3 187 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 SEZ6L2Q6UXD5 910 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 DOK3Q7L591 496 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 PLPP7Q8NBV4 271 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS18-202ENST00000558474 SPSB4Q96A44 273 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 C10orf35Q96D05 121 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 BRD7Q9NPI1 651 aa12.89□□□□□ -0.35
VPS18-202ENST00000558474 A0A1B0GVI7 797 aa12.88□□□□□ -0.35
VPS18-202ENST00000558474 NKX2-6A6NCS4 301 aa12.88□□□□□ -0.35
VPS18-202ENST00000558474 ZNF879B4DU55 563 aa12.88□□□□□ -0.35
VPS18-202ENST00000558474 GABRPO00591 440 aa12.88□□□□□ -0.35
VPS18-202ENST00000558474 SLC22A1O15245 554 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms