RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ANPEPP15144 967 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 MAGEB1P43366 347 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 GPR6P46095 362 aaPredicted RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 KLHL12Q53G59 568 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 DPY19L4Q7Z388 723 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 ERI1Q8IV48 349 aaKnown RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 OR8G5Q8NG78 346 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 ZNRF4Q8WWF5 429 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 RAB1CQ92928 201 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 ITFG2Q969R8 447 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 SLAMF6Q96DU3 332 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 TEAD3Q99594 435 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 RBM4BQ9BQ04 359 aaKnown RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 COPS4Q9BT78 406 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 GABARAPL1Q9H0R8 117 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 OPA3Q9H6K4 179 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 NIPAL2Q9H841 368 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 PNRC2Q9NPJ4 139 aaKnown RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 IL19Q9UHD0 177 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 NOP16Q9Y3C1 178 aaKnown RBP7.22□□□□□ -1.25
TPM1-213ENST00000558400 ORC6Q9Y5N6 252 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 HIVEP2P31629 2446 aa7.21□□□□□ -1.25
TPM1-213ENST00000558400 A8MV72 311 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 IQCF6A8MYZ5 107 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 CLDN25C9JDP6 229 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 LYNX1G3V0Z9 82 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 PPIHO43447 177 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 XRCC2O43543 280 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 LILRA1O75019 489 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 LYNP07948 512 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 LYNX1P0DP58 116 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 CFL1P23528 166 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 IGFBP5P24593 272 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 HSD11B1P28845 292 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 DDOSTP39656 456 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 SLC6A9P48067 706 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 SRP9P49458 86 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 RPS7P62081 194 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 TNFAIP6P98066 277 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 EIF2B1Q14232 305 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 KPNB1Q14974 876 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 SNCBQ16143 134 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 TSTQ16762 297 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 LCN1P1Q5VSP4 162 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 TMEM236Q5W0B7 351 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 KCTD18Q6PI47 426 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 DEGS2Q6QHC5 323 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 USP51Q70EK9 711 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 PGAP1Q75T13 922 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ZNF771Q7L3S4 317 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 TIGD4Q8IY51 512 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 OR52H1Q8NGJ2 320 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 OR6N2Q8NGY6 317 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 OTOSQ8NHW6 89 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ST7LQ8TDW4 575 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 THEM6Q8WUY1 208 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 RNF133Q8WVZ7 376 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 SPRYD4Q8WW59 207 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 TRUB1Q8WWH5 349 aaKnown RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 PYDC1Q8WXC3 89 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 CCL17Q92583 94 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 MNTQ99583 582 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ABHD6Q9BV23 337 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 YIPF3Q9GZM5 350 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 MED20Q9H944 212 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 MSL2Q9HCI7 577 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 YAE1D1Q9NRH1 226 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ZNF275Q9NSD4 429 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 TMEM100Q9NV29 134 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 TMEM160Q9NX00 188 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 PTTG3PQ9NZH4 202 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.21□□□□□ -1.26
TPM1-213ENST00000558400 TMEM14AQ9Y6G1 99 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 ABCA1O95477 2261 aa7.21□□□□□ -1.26
TPM1-213ENST00000558400 IGHV4-61A0A0C4DH41 118 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ZSCAN5BA6NJL1 495 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ACOD1A6NK06 481 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 SLC22A31A6NKX4 558 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 ZAR1LA6NP61 321 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 LMX1BO60663 402 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 CDC14BO60729 498 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 RP2O75695 350 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 NCR1O76036 304 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 H2BFMP0C1H6 154 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 IGHV4-31P0DP07 118 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 PCMT1P22061 227 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 CPT2P23786 658 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 RPS27P42677 84 aaKnown RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 PRKXP51817 358 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 RAD23AP54725 363 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 EFNB1P98172 346 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 MZT1Q08AG7 82 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 DBPQ10586 325 aaPredicted RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 APOFQ13790 326 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 GK2Q14410 553 aaPredicted RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 HLXQ14774 488 aaPredicted RBP7.2□□□□□ -1.26
TPM1-213ENST00000558400 SLX4IPQ5VYV7 408 aa7.2□□□□□ -1.26
TPM1-213ENST00000558400 NXNL2Q5VZ03 156 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms