RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 IGKV3-15P01624 115 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 MRPL3P09001 348 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 SNRPAP09012 282 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 PRKACBP22694 351 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 NPBWR2P48146 333 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 CSNK1EP49674 416 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 IRX3P78415 501 aaPredicted RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 CXCL6P80162 114 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 HMGCS1Q01581 520 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 GK3PQ14409 553 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 TOMM34Q15785 309 aaPredicted RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 CGB2Q6NT52 195 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 ASCL5Q7RTU5 278 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 PNKDQ8N490 385 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 C17orf78Q8N4C9 275 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZADH2Q8N4Q0 377 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 RNF10Q8N5U6 811 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 LINC01006Q8NI28 216 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 NEIL3Q8TAT5 605 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 CHCHD10Q8WYQ3 142 aaPredicted RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 TMEM101Q96IK0 257 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 MTMR9Q96QG7 549 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 TBX15Q96SF7 602 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 KIR3DX1Q9H7L2 352 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 LYRM4Q9HD34 91 aa1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 EXOSC4Q9NPD3 245 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 DDX18Q9NVP1 670 aaKnown RBP1.01□□□□□ -2.25
CTDSPL2-202ENST00000558373 RGPD2P0DJD1 1756 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ERCC6L2Q5T890 1561 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 CEP162Q5TB80 1403 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 RRBP1Q9P2E9 1410 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 MYOM2P54296 1465 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 FYCO1Q9BQS8 1478 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ABCC2Q92887 1545 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 DOCK2Q92608 1830 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 LOC100506127A0A0U1RQW1 187 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SMKR1H3BMG3 65 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 M0QX08 132 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 PSMD11O00231 422 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 UPK2O00526 184 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SCAMP2O15127 329 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZZEF1O43149 2961 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 B4GALT5O43286 388 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 RAD51CO43502 376 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 CLDN11O75508 207 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SRP72O76094 671 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 VAMP5O95183 116 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 CLIC3O95833 236 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 IGHV3-43DP0DP04 118 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 BCKDHBP21953 392 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ELK4P28324 431 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 MAS1LP35410 378 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 NUDT2P50583 147 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 PSMD4P55036 377 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 APOC4P55056 127 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF121P58317 390 aaPredicted RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 EGFEM1PQ0D2K5 195 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 CDH17Q12864 832 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 Q3ZCU0 254 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SPINK14Q6IE38 97 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 C3orf62Q6ZUJ4 267 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SLC35D2Q76EJ3 337 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SAXO1Q8IYX7 474 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 H1FOOQ8IZA3 346 aaPredicted RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 COX18Q8N8Q8 333 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 MAPK1IP1LQ8NDC0 245 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 NPBQ8NG41 125 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 OR4Q3Q8NH05 313 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 OR9G1Q8NH87 305 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SLC7A13Q8TCU3 470 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 RAB1CQ92928 201 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 TMEM54Q969K7 222 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 YIPF5Q969M3 257 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 MRGPRFQ96AM1 343 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ZNF488Q96MN9 340 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 GLT1D1Q96MS3 346 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 GON7Q9BXV9 100 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 DEFB126Q9BYW3 111 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SYNDIG1Q9H7V2 258 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 GNB4Q9HAV0 340 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 PATZ1Q9HBE1 687 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ARMCX1Q9P291 453 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 HES2Q9Y543 173 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 NUP210LQ5VU65 1888 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 UBN2Q6ZU65 1347 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 MYH6P13533 1939 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 TRIP12Q14669 1992 aaPredicted RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 EVPLQ92817 2033 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SMG6Q86US8 1419 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 NKTRP30414 1462 aaKnown RBP1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ARAP1Q96P48 1450 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SPEF2Q9C093 1822 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 TULP4Q9NRJ4 1543 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 CELSR2Q9HCU4 2923 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 ALPK3Q96L96 1907 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 OTOFQ9HC10 1997 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 A0A1B0GUH1 482 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 SYCE1LA8MT33 242 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 GFYI3L273 518 aa1□□□□□ -2.25
CTDSPL2-202ENST00000558373 K7N7A8 449 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms