RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 FOLR3P41439 243 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 HTR2BP41595 481 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 RAD52P43351 418 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 EIF1AXP47813 144 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 SUCLG1P53597 346 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 MLF1P58340 268 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 UBE2MP61081 183 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 RAC1P63000 192 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 H3F3AP84243 136 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 PMPCAQ10713 525 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ECH1Q13011 328 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 PPA1Q15181 289 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 PNLIPRP3Q17RR3 467 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ODF4Q2M2E3 257 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 TMEM176BQ3YBM2 270 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 B3GNTL1Q67FW5 361 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 C16orf47Q6ZP98 133 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 Q6ZSR3 168 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ZNF627Q7L945 461 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 ZNF584Q8IVC4 421 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 KDM8Q8N371 416 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ZDHHC22Q8N966 263 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 KCNG3Q8TAE7 436 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 LRRC20Q8TCA0 184 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 AQP3Q92482 292 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ATOH1Q92858 354 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 MR1Q95460 341 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 TMEM54Q969K7 222 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 FGGYQ96C11 551 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 SCGB3A2Q96PL1 93 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 PIGQQ9BRB3 760 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 EDEM2Q9BV94 578 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 EXO5Q9H790 373 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 C12orf4Q9NQ89 552 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 OCIAD1Q9NX40 245 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 MED29Q9NX70 200 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 GLTPQ9NZD2 209 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 MRPL15Q9P015 296 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 EIF3KQ9UBQ5 218 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 UBQLN2Q9UHD9 624 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 FBXO4Q9UKT5 387 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 MAB21L2Q9Y586 359 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 MRPS18BQ9Y676 258 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 AUP1Q9Y679 476 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ADAMTS9Q9P2N4 1935 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 CEP192Q8TEP8 1941 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 NSG1A0A0A6YYJ2 146 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 A0A1W2PPL8 197 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PLSCR5A0PG75 271 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 C17orf51A8MQB3 221 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 H0YC42 278 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PYCARD-AS1I3L0S3 204 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 M0R233 179 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 P2RY10O00398 339 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 AKR7A2O43488 359 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 WDPCPO95876 746 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 RLN1P04808 185 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 QDPRP09417 244 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 COX6A1P12074 109 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 HLA-GP17693 338 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 IL11P20809 199 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 MSR1P21757 451 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ACP1P24666 158 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 AGTR1P30556 359 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ALDH3B1P43353 468 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ZNF84P51523 738 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 EFNB2P52799 333 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 CLDN6P56747 220 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 TAS2R31P59538 309 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ZP1P60852 638 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 RPS15P62841 145 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 FMODQ06828 376 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 SRSF4Q08170 494 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 SPOCK1Q08629 439 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 CHAF1BQ13112 559 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 GK2Q14410 553 aaPredicted RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 LGALSLQ3ZCW2 172 aaPredicted RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 TMEM255AQ5JRV8 349 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 ASPHD2Q6ICH7 369 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 LIN54Q6MZP7 749 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 MTFR2Q6P444 385 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 Q6ZTK2 550 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 RPS19BP1Q86WX3 136 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 LINC00346Q8IVM7 164 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 SLC38A6Q8IZM9 456 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 TMEM156Q8N614 296 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PNLDC1Q8NA58 520 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 BEST4Q8NFU0 473 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 OR2AK2Q8NG84 335 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 OR51S1Q8NGJ8 323 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 TNFAIP8L1Q8WVP5 186 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PP6455Q8WZ26 134 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 PMEPA1Q969W9 287 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
SPG11-209ENST00000558253 STRADBQ9C0K7 418 aa7.37□□□□□ -1.23
SPG11-209ENST00000558253 NELFAQ9H3P2 528 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms