RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 FAM20BO75063 409 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 PLAUP00749 431 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 LCATP04180 440 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 LCKP06239 509 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 DANCRP0C864 163 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 CCL2P13500 99 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 RAC2P15153 192 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 SELEP16581 610 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 GCH1P30793 250 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 SERPINF1P36955 418 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 CX3CR1P49238 355 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 FABP6P51161 128 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 ZMAT1Q5H9K5 638 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 PAMR1Q6UXH9 720 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 LRRN1Q6UXK5 716 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF101Q8IZC7 436 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 CCDC54Q8NEL0 328 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 MARS2Q96GW9 593 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 AMELYQ99218 206 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 OR10A2Q9H208 303 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 AMBNQ9NP70 447 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 FKBP14Q9NWM8 211 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 ERVK13-1Q9NX77 482 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 AASSQ9UDR5 926 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 KLHDC2Q9Y2U9 406 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 CAB39Q9Y376 341 aaPredicted RBP12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 APCP25054 2843 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 A0A1W2PPR1 153 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 MT-ND5P03915 603 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 DBHP09172 617 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 FAM157BP0CG42 384 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 ATP6V1B1P15313 513 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 THBS4P35443 961 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 DDOSTP39656 456 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 PRKXP51817 358 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 KLF3P57682 345 aaPredicted RBP12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF85Q03923 595 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 ST3GAL4Q11206 333 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 FAM209AQ5JX71 171 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 FDX2Q6P4F2 183 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 TMPRSS11AQ6ZMR5 421 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 PRSS45Q7RTY3 260 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 STX19Q8N4C7 294 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF540Q8NDQ6 660 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 BPIFB6Q8NFQ5 453 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 SYNPRQ8TBG9 265 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 SLC7A6Q92536 515 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 GGHQ92820 318 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 CNBD2Q96M20 576 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 NUFIP1Q9UHK0 495 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 NOP16Q9Y3C1 178 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 LRRC42Q9Y546 428 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 PCDHGB5Q9Y5G0 923 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 R4GMQ9 66 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
SUPT16H-208ENST00000557652 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 TMEM269A0A1B0GVZ9 245 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 TMEM129A0AVI4 362 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 RAF1P04049 648 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 ANXA2P07355 339 aaKnown RBP12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 OR4A8P0C604 315 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 KITLGP21583 273 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 HCCSP53701 268 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 GABARAPL2P60520 117 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 SNRPD2P62316 118 aaKnown RBP12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 SLC35A2P78381 396 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 LAIR2Q6ISS4 152 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 YIPF7Q8N8F6 280 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 OR52N1Q8NH53 320 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 KLF14Q8TD94 323 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 HAVCR1Q96D42 359 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 ALG8Q9BVK2 526 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 MS4A5Q9H3V2 200 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 DUSP21Q9H596 190 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 MYRFQ9Y2G1 1151 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 PMF1-BGLAPU3KQ54 211 aa12.13□□□□□ -0.47
SUPT16H-208ENST00000557652 LOC110117498-PIK3R3F6TDL0 507 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 XPNPEP2O43895 674 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 GPRIN2O60269 458 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 APOL3O95236 402 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 ATE1O95260 518 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 NGFP01138 241 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 CDK1P06493 297 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 PRF1P14222 555 aa12.12□□□□□ -0.47
SUPT16H-208ENST00000557652 PAX1P15863 534 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms