RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CD200P41217 278 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 RIGQ13278 110 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 NEURL3Q96EH8 262 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM204Q9BSN7 226 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 IL25Q9H293 177 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 SLC25A4P12235 298 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 CTBSQ01459 385 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 ECM1Q16610 540 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 LY6G5CQ5SRR4 150 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 ADOQ96SZ5 270 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 DRGXA6NNA5 263 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 KCNJ10P78508 379 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 LYG2Q86SG7 212 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 STXBP6Q8NFX7 210 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 PXDNQ92626 1479 aa8.1□□□□□ -1.11
SYNE3-205ENST00000557275 KIDINS220Q9ULH0 1771 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 AQP7P3A6NL99 342 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 CRHP06850 196 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 CST6Q15828 149 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SSX1Q16384 188 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SPANXN5Q5MJ07 72 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 LRRC18Q8N456 261 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM9BQ9NQ34 198 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 LYZL6O75951 148 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 OR10J1P30954 320 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 FXNQ16595 210 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM241Q24JQ0 296 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF542PQ5EBM4 170 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ANKRD36A6QL64 1941 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 PRICKLE3O43900 615 aaPredicted RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 GPR75O95800 540 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SLC10A3P09131 477 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 MDH2P40926 338 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SEMA3BQ13214 749 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SQSTM1Q13501 440 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF766Q5HY98 468 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 NECAP1Q8NC96 275 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF346Q9UL40 294 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ACVRL1P37023 503 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 DSC1Q08554 894 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 JOSD1Q15040 202 aaPredicted RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 C10orf126Q8N4M7 172 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 LRFN3Q9BTN0 628 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 GDE1Q9NZC3 331 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 NUMBLQ9Y6R0 609 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 TRAV27A0A087WT01 109 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SEMA4FO95754 770 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 STATHP02808 62 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 HMGN2P05204 90 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ZCCHC14Q8WYQ9 949 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 CHST6Q9GZX3 395 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 HSD3B7Q9H2F3 369 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 DOK5Q9P104 306 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ARRDC5A6NEK1 342 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 RPL29P47914 159 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 GPX7Q96SL4 187 aaPredicted RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 MRPL37Q9BZE1 423 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 A4GALTQ9NPC4 353 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SALL4Q9UJQ4 1053 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 IGSF23A1L1A6 192 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 APOBEC1P41238 236 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 PLP1P60201 277 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 OR8G1Q15617 311 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 BCAT2O15382 392 aaPredicted RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 CST4P01036 141 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 NID1P14543 1247 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 PSMG4Q5JS54 123 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 AAED1Q7RTV5 226 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM230Q96A57 120 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 CPEB1Q9BZB8 566 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 NAA60Q9H7X0 242 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 LSM2Q9Y333 95 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 HSD17B6O14756 317 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 PDE6DO43924 150 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 EXD3Q8N9H8 876 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 OCIAD1Q9NX40 245 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 OR5V1Q9UGF6 321 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 MYO18BQ8IUG5 2567 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 A0A0D9SEW6 157 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ACOD1A6NK06 481 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 NUDT3O95989 172 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 MAT1AQ00266 395 aaKnown RBP8.09□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF426Q9BUY5 554 aa8.09□□□□□ -1.11
SYNE3-205ENST00000557275 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.12
SYNE3-205ENST00000557275 RAD52P43351 418 aa8.09□□□□□ -1.12
SYNE3-205ENST00000557275 CARD18P57730 90 aa8.09□□□□□ -1.12
SYNE3-205ENST00000557275 TAS2R60P59551 318 aa8.09□□□□□ -1.12
SYNE3-205ENST00000557275 C2orf50Q96LR7 162 aa8.09□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF785A8K8V0 405 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 SGK494L7N484 410 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 NDUFB7P17568 137 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 CEBPBP17676 345 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 GALP22466 123 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 CLDN20P56880 219 aa8.08□□□□□ -1.12
SYNE3-205ENST00000557275 NR0B2Q15466 257 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms