RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 IGHV3-13P01766 116 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 ANXA2P07355 339 aaKnown RBP14.96□□□□□ -0.01
SHMT2-225ENST00000556798 ATP6V1E1P36543 226 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 CAPGP40121 348 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 MTNR1AP48039 350 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 AQP4P55087 323 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 CXCR4P61073 352 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 POU4F2Q12837 409 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 PSG7Q13046 419 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 TMED1Q13445 227 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 TESK1Q15569 626 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 SSX6Q7RTT6 188 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 KRT77Q7Z794 578 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-225ENST00000556798 OR10H4Q8NGA5 316 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 OR5L1Q8NGL2 311 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 CMBLQ96DG6 245 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 COG8Q96MW5 612 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 BRD7Q9NPI1 651 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 CLN6Q9NWW5 311 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 TMEM14AQ9Y6G1 99 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 ITPR3Q14573 2671 aa14.96□□□□□ -0.02
SHMT2-225ENST00000556798 VPS13CQ709C8 3753 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 H3BSA7 217 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 TIMM8AO60220 97 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-225ENST00000556798 GNAO1P09471 354 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF121P58317 390 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF91Q05481 1191 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 RIPK1Q13546 671 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 KCTD18Q6PI47 426 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF322Q6U7Q0 402 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-225ENST00000556798 WFDC11Q8NEX6 87 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 OR2AE1Q8NHA4 323 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 CNIH3Q8TBE1 160 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 SNX33Q8WV41 574 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 OR8B4Q96RC9 309 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 AMBNQ9NP70 447 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 IKZF2Q9UKS7 526 aa14.95□□□□□ -0.02
SHMT2-225ENST00000556798 CELSR1Q9NYQ6 3014 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 TBX1O43435 398 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 SSX4O60224 188 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 WBP4O75554 376 aaKnown RBP14.94□□□□□ -0.02
SHMT2-225ENST00000556798 DBTP11182 482 aaKnown RBP14.94□□□□□ -0.02
SHMT2-225ENST00000556798 SMN1Q16637 294 aaKnown RBP14.94□□□□□ -0.02
SHMT2-225ENST00000556798 GLYATL3Q5SZD4 288 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 FBXW12Q6X9E4 464 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 PLEKHG7Q6ZR37 379 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 FAM57BQ71RH2 274 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 RHOUQ7L0Q8 258 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 OR5AS1Q8N127 324 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 ASB17Q8WXJ9 295 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 Q96MT0 163 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 MNTQ99583 582 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 MROQ9BYG7 248 aa14.94□□□□□ -0.02
SHMT2-225ENST00000556798 PURGQ9UJV8 347 aaKnown RBP14.94□□□□□ -0.02
SHMT2-225ENST00000556798 A0A1W2PQL4 384 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-225ENST00000556798 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 SNTNA6NMZ2 147 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 H0YAE9 185 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 PHYHO14832 338 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 RRP9O43818 475 aaKnown RBP14.93□□□□□ -0.02
SHMT2-225ENST00000556798 OR2T7P0C7T2 308 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 RAC2P15153 192 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 TUBG1P23258 451 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 PSMA6P60900 246 aaKnown RBP14.93□□□□□ -0.02
SHMT2-225ENST00000556798 ROM1Q03395 351 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF92Q03936 586 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 MALLQ13021 153 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 GK2Q14410 553 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-225ENST00000556798 C6orf52Q5T4I8 152 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 OR2T2Q6IF00 324 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 USP51Q70EK9 711 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 PRSS45Q7RTY3 260 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF679Q8IYX0 411 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 SETD9Q8NE22 299 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 OR2T27Q8NH04 317 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 HAVCR1Q96D42 359 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 LGALS12Q96DT0 336 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 RAB1BQ9H0U4 201 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 MS4A5Q9H3V2 200 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 MSL2Q9HCI7 577 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 TUBG2Q9NRH3 451 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF319Q9P2F9 582 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 GPR160Q9UJ42 338 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 FBXO9Q9UK97 447 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-225ENST00000556798 TANC2Q9HCD6 1990 aa14.93□□□□□ -0.02
SHMT2-225ENST00000556798 PLSCR5A0PG75 271 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 APOC1P02654 83 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 KITLGP21583 273 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 MAGEB1P43366 347 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 MMP15P51511 669 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 RIDAP52758 137 aaKnown RBP14.92□□□□□ -0.02
SHMT2-225ENST00000556798 EFNA4P52798 201 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 ISL1P61371 349 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF85Q03923 595 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 IL18R1Q13478 541 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 GFOD2Q3B7J2 385 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 SHEQ5VZ18 495 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 PGAP1Q75T13 922 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 MRPL21Q7Z2W9 205 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms