RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 ZFPL1O95159 310 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 H2BFMP0C1H6 154 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RFC3P40938 356 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MMP16P51512 607 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PPP5CP53041 499 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 C16orf87Q6PH81 154 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 LRFN4Q6PJG9 635 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GPR137CQ8N3F9 429 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ZNF676Q8N7Q3 588 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ZIC4Q8N9L1 334 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ZNF385AQ96PM9 386 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SLC6A15Q9H2J7 730 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SEC61A2Q9H9S3 476 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 BCO1Q9HAY6 547 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 Q9UFV3 132 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RABL2BQ9UNT1 228 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ALPK2Q86TB3 2170 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 IGHV3-15A0A0B4J1V0 119 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GPANK1O95872 356 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ISG15P05161 165 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CD2P06729 351 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GLI4P10075 376 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RAB3BP20337 219 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PSMB10P40306 273 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 STARP49675 285 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RPS11P62280 158 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 TMEM244Q5VVB8 128 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 METAP1DQ6UB28 335 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 LRRN1Q6UXK5 716 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SYT9Q86SS6 491 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CCDC190Q86UF4 302 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MFSD4AQ8N468 514 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GJC3Q8NFK1 279 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PRRG4Q9BZD6 226 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 EXO5Q9H790 373 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GLRX2Q9NS18 164 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 UGT2A1Q9Y4X1 527 aa12.48□□□□□ -0.41
TRAPPC6B-206ENST00000556765 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 NOTOA8MTQ0 251 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RGS5O15539 181 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 IFNA2P01563 188 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 OCM2P0CE71 109 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 BMP4P12644 408 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ZNF12P17014 697 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ACHEP22303 614 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SCAND1P57086 179 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 NANOS3P60323 173 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PCBD1P61457 104 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MXD1Q05195 221 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 DBPQ10586 325 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 LRRC75A-AS1Q8N1F1 130 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CCDC54Q8NEL0 328 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 OR5M9Q8NGP3 310 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ZCCHC4Q9H5U6 513 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SP140LQ9H930 580 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 DDX28Q9NUL7 540 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ABRACLQ9P1F3 81 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 LHFPL6Q9Y693 200 aa12.47□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ISPDA4D126 451 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PSMD9O00233 223 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 AQP7O14520 342 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MAGEB4O15481 346 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SRSF10O75494 262 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CST2P09228 141 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SRMP19623 302 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 CTSSP25774 331 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 HSD11B1P28845 292 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 SELENOPP49908 381 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 PSMA6P60900 246 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 ECH1Q13011 328 aa12.46□□□□□ -0.41
TRAPPC6B-206ENST00000556765 TAF13Q15543 124 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms