RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RHOUQ7L0Q8 258 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 MEPCEQ7L2J0 689 aaKnown RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 SHFQ7M4L6 423 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 ZNF525Q8N782 197 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 OR6N2Q8NGY6 317 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 OTOSQ8NHW6 89 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 C10orf105Q8TEF2 133 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 NEU4Q8WWR8 484 aaPredicted RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 GTF3AQ92664 365 aaKnown RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 APOBEC3DQ96AK3 386 aaPredicted RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 CMBLQ96DG6 245 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 SLAMF6Q96DU3 332 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 COX4I2Q96KJ9 171 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 HRASLS5Q96KN8 279 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 IL4I1Q96RQ9 567 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 PRRG3Q9BZD7 231 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 YIPF3Q9GZM5 350 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 RAB1BQ9H0U4 201 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 TOR3AQ9H497 397 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 DYNLRB1Q9NP97 96 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 HAO2Q9NYQ3 351 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 NKIRAS2Q9NYR9 191 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 SONP18583 2426 aaKnown RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 ABCA1O95477 2261 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 IGHV4-30-2A0A087WSY4 118 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 A0A1W2PPW3 197 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 ZSCAN5BA6NJL1 495 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 C17orf100A8MU93 164 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 PRR32B1ATL7 298 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 VWC2LB2RUY7 222 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 H7C1Q1 480 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 M0R135 149 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 NCR1O76036 304 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 HPXP02790 462 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 ADH4P08319 380 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 RAC2P15153 192 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 GCH1P30793 250 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 HCCSP53701 268 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 RAD23AP54725 363 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 TPTEP56180 551 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 DSCR9P59020 149 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 CDK5R2Q13319 367 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 EIF2B1Q14232 305 aaKnown RBP8.22□□□□□ -1.09
SRP54-210ENST00000556380 HLXQ14774 488 aaPredicted RBP8.22□□□□□ -1.09
SRP54-210ENST00000556380 DRAM2Q6UX65 266 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 Q6ZR03 302 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 SLC16A9Q7RTY1 509 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 PRSS45Q7RTY3 260 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 ZNF786Q8N393 782 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 OR5L1Q8NGL2 311 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 OR8J1Q8NGP2 316 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 TRUB1Q8WWH5 349 aaKnown RBP8.22□□□□□ -1.09
SRP54-210ENST00000556380 STMN2Q93045 179 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 SPTSSAQ969W0 71 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 EME1Q96AY2 570 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 ZNF799Q96GE5 643 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 COG8Q96MW5 612 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 KCNJ15Q99712 375 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 TPK1Q9H3S4 243 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 CENPMQ9NSP4 180 aa8.22□□□□□ -1.09
SRP54-210ENST00000556380 PURGQ9UJV8 347 aaKnown RBP8.22□□□□□ -1.09
SRP54-210ENST00000556380 A0A1B0GWJ7 208 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SLC22A31A6NKX4 558 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 ZNF878C9JN71 531 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SLC16A6O15403 523 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 IGHV1-46P01743 117 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 LCATP04180 440 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 DAOP14920 347 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 GABRB1P18505 474 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 COL8A2P25067 703 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 GIFP27352 417 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 LIPAP38571 399 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 NAA10P41227 235 aaPredicted RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 MAGEB1P43366 347 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SLC15A1P46059 708 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 PRKXP51817 358 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SNRPGP62308 76 aaKnown RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 ELF3P78545 371 aaPredicted RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 MRPS11P82912 194 aaKnown RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 GK2Q14410 553 aaPredicted RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 RCN1Q15293 331 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 NKPD1Q17RQ9 610 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SNAI3Q3KNW1 292 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 OR2T2Q6IF00 324 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 SPATC1Q76KD6 591 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 UBASH3BQ8TF42 649 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 C18orf12Q96KH6 178 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 ZNF582Q96NG8 517 aaPredicted RBP8.21□□□□□ -1.1
SRP54-210ENST00000556380 COPS4Q9BT78 406 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 REG4Q9BYZ8 158 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 ADGRL4Q9HBW9 690 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 PTTG3PQ9NZH4 202 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 ZNF319Q9P2F9 582 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 GPR160Q9UJ42 338 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 COPS3Q9UNS2 423 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 ORC6Q9Y5N6 252 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 NAV3Q8IVL0 2385 aa8.21□□□□□ -1.1
SRP54-210ENST00000556380 HIVEP2P31629 2446 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LOC390937A0A1W2PQ73 354 aa8.2□□□□□ -1.1
SRP54-210ENST00000556380 LYNX1G3V0Z9 82 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms