RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LRP12Q9Y561 859 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 N6AMT1Q9Y5N5 214 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 USF3Q68DE3 2245 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 RELNP78509 3460 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 ABCA12Q86UK0 2595 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 TMEM269A0A1B0GVZ9 245 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 B9A039 149 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 LOC110117498-PIK3R3F6TDL0 507 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 J3QRE1 110 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PSMD9O00233 223 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MYL12BO14950 172 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 TBX1O43435 398 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 XRCC2O43543 280 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 XPNPEP2O43895 674 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 RPSAP08865 295 aaKnown RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 OR4A8P0C604 315 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PSKH1P11801 424 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 RAC2P15153 192 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 SELEP16581 610 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 EEF1B2P24534 225 aaKnown RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 TTKP33981 857 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 THBS4P35443 961 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 WNT5AP41221 380 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 EVX1P49640 407 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MMP16P51512 607 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 GBX2P52951 348 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 KLF3P57682 345 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 ZNF121P58317 390 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 SNRPD2P62316 118 aaKnown RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 ZNF85Q03923 595 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 RSPO1Q2MKA7 263 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 CDONQ4KMG0 1287 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 ZMAT1Q5H9K5 638 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 LIPNQ5VXI9 398 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 HIST2H2BCQ6DN03 193 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 COLCA1Q6ZS62 124 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 RFPL4BQ6ZWI9 263 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 FAM57BQ71RH2 274 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MRPL21Q7Z2W9 205 aaKnown RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 LHFPL3Q86UP9 236 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 ZNF101Q8IZC7 436 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MUC15Q8N387 334 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 KLHL36Q8N4N3 616 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PAQR4Q8N4S7 273 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 SYNPRQ8TBG9 265 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 SLC25A40Q8TBP6 338 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 TMEM171Q8WVE6 324 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 GGHQ92820 318 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PIGTQ969N2 578 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MRPL24Q96A35 216 aaKnown RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 TTTY10Q9BZA0 68 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PLK3Q9H4B4 646 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 BRD7Q9NPI1 651 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 CBLN4Q9NTU7 201 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 CGGBP1Q9UFW8 167 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 DUSP13Q9UII6 198 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 GNG8Q9UK08 70 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 GTF2A1LQ9UNN4 478 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 ERGIC3Q9Y282 383 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 MYRFQ9Y2G1 1151 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 CAB39Q9Y376 341 aaPredicted RBP6.58□□□□□ -1.36
TDP1-214ENST00000556063 LRRC42Q9Y546 428 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PCDHGB5Q9Y5G0 923 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 SNX5Q9Y5X3 404 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 R4GMQ9 66 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 PMF1-BGLAPU3KQ54 211 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 ARFGEF3Q5TH69 2177 aa6.58□□□□□ -1.36
TDP1-214ENST00000556063 A0A1W2PPW3 197 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 J3QLW9 94 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 RGS10O43665 173 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 GPRIN2O60269 458 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 MRPS14O60783 128 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 RPP14O95059 124 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 NGFP01138 241 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 CDK1P06493 297 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 ERCC1P07992 297 aaPredicted RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 HTR1AP08908 422 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 SLC2A1P11166 492 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 ZNF250P15622 560 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 ZNF19P17023 458 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 CRHBPP24387 322 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 LIPAP38571 399 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 DDOSTP39656 456 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 EFNB3Q15768 340 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 ADIPOQQ15848 244 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 TIGD6Q17RP2 521 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 TP53I3Q53FA7 332 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 BCL2L15Q5TBC7 163 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 MBNL2Q5VZF2 373 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 LAIR2Q6ISS4 152 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 FBXW12Q6X9E4 464 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 PGAP1Q75T13 922 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 SSX6Q7RTT6 188 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 FTMTQ8N4E7 242 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 OR52N1Q8NH53 320 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 LILRB1Q8NHL6 650 aaPredicted RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 KLF14Q8TD94 323 aaPredicted RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 NEUROG1Q92886 237 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms