RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 B3GALT5-AS1P59052 145 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 RAC3P60763 192 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PPP3R1P63098 170 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 RASGEF1BQ0VAM2 473 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 CAMK2DQ13557 499 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ALKBH1Q13686 389 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SLC17A1Q14916 467 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 OR1C1Q15619 314 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 HSD17B12Q53GQ0 312 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ZMAT1Q5H9K5 638 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 AGAP7PQ5VUJ5 663 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 LIPNQ5VXI9 398 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SPINK14Q6IE38 97 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 DEGS2Q6QHC5 323 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 UNQ9370/PRO34162Q6UXP9 181 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 NHLRC1Q6VVB1 395 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 YRDCQ86U90 279 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 CCDC190Q86UF4 302 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF679Q8IYX0 411 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PARP16Q8N5Y8 322 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MINDY2Q8NBR6 621 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 NOXO1Q8NFA2 376 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SLC26A10Q8NG04 563 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 OR2M7Q8NG81 312 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 OR5AK2Q8NH90 309 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 INTS12Q96CB8 462 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PGLYRP3Q96LB9 341 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 WDFY2Q96P53 400 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 AGAP4Q96P64 663 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 OR8B4Q96RC9 309 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 EMC6Q9BV81 110 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SF3B5Q9BWJ5 86 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MRPL13Q9BYD1 178 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 OR2B2Q9GZK3 357 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 SLITRK2Q9H156 845 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 ZMAT3Q9HA38 289 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 TIGARQ9NQ88 270 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MRPL22Q9NWU5 206 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 KLHL13Q9P2N7 655 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 B3GAT1Q9P2W7 334 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 MRM2Q9UI43 246 aaKnown RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 KCNG2Q9UJ96 466 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 KLHDC2Q9Y2U9 406 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 KLF13Q9Y2Y9 288 aaPredicted RBP6.02□□□□□ -1.45
SLIRP-204ENST00000555890 UGT2A1Q9Y4X1 527 aa6.02□□□□□ -1.45
SLIRP-204ENST00000555890 PRKDCP78527 4128 aaKnown RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TENM3Q9P273 2699 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 A0A0G2JMM0 328 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 A0A0J9YW62 118 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 A0A1W2PPB8 328 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 A0A1W2PPL8 197 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 A0A1W2PRS3 328 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 ARGFXA6NJG6 315 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 LRRC3CA6NJW4 275 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TMEM212A6NML5 194 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 NOTOA8MTQ0 251 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 KIR3DP1A8MWS1 328 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TNFSF11O14788 317 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TRAF3IP2O43734 574 aaPredicted RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TMEM127O75204 238 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 UPK3AO75631 287 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 UPK1BO75841 260 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 SC5DO75845 299 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 NEURL1O76050 574 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 ABHD16AO95870 558 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 GPANK1O95872 356 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 WDPCPO95876 746 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 F10P00742 488 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 UCHL1P09936 223 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 PGA4P0DJD7 388 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 PGA3P0DJD8 388 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 RAB3BP20337 219 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 PTBP1P26599 531 aaKnown RBP eCLIP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 APEX1P27695 318 aaKnown RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 CCR9P51686 369 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 CLDN17P56750 224 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 DEFA1P59665 94 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 DEFA3P59666 94 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 NKX6-1P78426 367 aaPredicted RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 H3F3AP84243 136 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 PLGLB1Q02325 96 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 FMODQ06828 376 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 INSL4Q14641 139 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 ETFDHQ16134 617 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 MEP1BQ16820 701 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 PCK2Q16822 640 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 TRIM16LQ309B1 348 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 Q499Y3 187 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 IDNKQ5T6J7 187 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 CD276Q5ZPR3 534 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 HBMQ6B0K9 141 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 SLC25A25Q6KCM7 469 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 SLC25A47Q6Q0C1 308 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 KLHL24Q6TFL4 600 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 METAP1DQ6UB28 335 aaPredicted RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 LINC00696Q6ZRV3 163 aa6.01□□□□□ -1.45
SLIRP-204ENST00000555890 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.01□□□□□ -1.45
SLIRP-204ENST00000555890 GALNT16Q8N428 558 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms