RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 OR2T29Q8NH02 315 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
PCNX4-209ENST00000555569 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 POP5Q969H6 163 aaKnown RBP11.62□□□□□ -0.55
PCNX4-209ENST00000555569 MAP6Q96JE9 813 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 DGCR6LQ9BY27 220 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 REEP1Q9H902 201 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 TMEM100Q9NV29 134 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 OPN4Q9UHM6 478 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 PRPF19Q9UMS4 504 aaKnown RBP11.62□□□□□ -0.55
PCNX4-209ENST00000555569 BAIAP2Q9UQB8 552 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
PCNX4-209ENST00000555569 U3KQV3 271 aa11.62□□□□□ -0.55
PCNX4-209ENST00000555569 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 F5H5P2 479 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 M0R135 149 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 RGS9O75916 674 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 T-ENOLP0DO92 83 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 RPS27P42677 84 aaKnown RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 PRSS12P56730 875 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 GK2Q14410 553 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 MUC20Q8N307 709 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 OR51L1Q8NGJ5 315 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 OR4Q3Q8NH05 313 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 ZFAND2BQ8WV99 257 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 ZNRF4Q8WWF5 429 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 SLCO4A1Q96BD0 722 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF799Q96GE5 643 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 DDX28Q9NUL7 540 aaKnown RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 ARMC1Q9NVT9 282 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
PCNX4-209ENST00000555569 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
PCNX4-209ENST00000555569 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 A0A1B0GWJ7 208 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 A8MXK9 166 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 SOX14O95416 240 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
PCNX4-209ENST00000555569 FMO3P31513 532 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 SLC6A9P48067 706 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 SLC25A1P53007 311 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
PCNX4-209ENST00000555569 CRMP1Q14194 572 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF181Q2M3W8 571 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 USP43Q70EL4 1123 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 PGAP1Q75T13 922 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 MRPL21Q7Z2W9 205 aaKnown RBP11.6□□□□□ -0.55
PCNX4-209ENST00000555569 MOGAT3Q86VF5 341 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 OR2T33Q8NG76 320 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
PCNX4-209ENST00000555569 ASB9Q96DX5 294 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
PCNX4-209ENST00000555569 RBM4Q9BWF3 364 aaKnown RBP11.6□□□□□ -0.55
PCNX4-209ENST00000555569 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF205O95201 554 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 FSHBP01225 129 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 IFNGP01579 166 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 HLA-DPB1P04440 258 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 GYPBP06028 91 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SPARCP09486 303 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 RAP2AP10114 183 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 PSKH1P11801 424 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF12P17014 697 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SPI1P17947 270 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 OTX1P32242 354 aaPredicted RBP11.59□□□□□ -0.55
PCNX4-209ENST00000555569 ENTPD1P49961 510 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 HILS1P60008 231 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SNAI3Q3KNW1 292 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 ESCO2Q56NI9 601 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 DRAM2Q6UX65 266 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 DCXRQ7Z4W1 244 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 C1orf87Q8N0U7 546 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 CELF2-AS1Q8N7Q2 184 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 ZNF511Q8NB15 262 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 DEFB108BQ8NET1 73 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 OR10G2Q8NGC3 310 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SPRYD4Q8WW59 207 aaPredicted RBP11.59□□□□□ -0.55
PCNX4-209ENST00000555569 CLPTM1LQ96KA5 538 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SLC6A7Q99884 636 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 COPS4Q9BT78 406 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 SUCNR1Q9BXA5 334 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 NMNAT2Q9BZQ4 307 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 C1orf21Q9H246 121 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 TMEM165Q9HC07 324 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 MMP26Q9NRE1 261 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 TAS2R1Q9NYW7 299 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
PCNX4-209ENST00000555569 RIIAD1A6NNX1 92 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 CD300LBA8K4G0 201 aa11.58□□□□□ -0.56
PCNX4-209ENST00000555569 ZNF593O00488 134 aaPredicted RBP11.58□□□□□ -0.56
PCNX4-209ENST00000555569 WNT2P09544 360 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms