RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SIGLEC7Q9Y286 467 aa0.71□□□□□ -2.3
SRP54-207ENST00000555535 STARD10Q9Y365 291 aa0.71□□□□□ -2.3
SRP54-207ENST00000555535 CSDC2Q9Y534 153 aaKnown RBP0.71□□□□□ -2.3
SRP54-207ENST00000555535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.7□□□□□ -2.3
SRP54-207ENST00000555535 IGHV3-49A0A0A0MS15 119 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 A0A1W2PPE3 182 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SMCO3A2RU48 225 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 XKRY2A2RUG3 117 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 KRBOX1C9JBD0 128 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SMKR1H3BMG3 65 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 TEX46H3BTG2 121 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 MPHOSPH10O00566 681 aaKnown RBP0.7□□□□□ -2.3
SRP54-207ENST00000555535 MFNGO00587 321 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 CLOCKO15516 846 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 NMT2O60551 498 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SLC19A2O60779 497 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SPAG6O75602 509 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 FLOT1O75955 427 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 OR2J3O76001 311 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 TGM6O95932 706 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 CSNK2A2P19784 350 aaPredicted RBP0.7□□□□□ -2.3
SRP54-207ENST00000555535 TGFBR2P37173 567 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SYKP43405 635 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PRLHRP49683 370 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 NDUFA8P51970 172 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 ACLYP53396 1101 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 ILKQ13418 452 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PPP1R7Q15435 360 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 ZNF726P1Q15940 193 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PSMD5Q16401 504 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 DEFB134Q4QY38 66 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PYDC2Q56P42 97 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 HSP90AB3PQ58FF7 597 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 GUSBP11Q6P575 273 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 CASP12Q6UXS9 341 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 RUFY3Q7L099 469 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 CMC1Q7Z7K0 106 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 TMEM150AQ86TG1 271 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 MDP1Q86V88 176 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 TBC1D21Q8IYX1 336 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 ZNF101Q8IZC7 436 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 LINC00469Q8N7U9 141 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 NECAB1Q8N987 351 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 OR9K2Q8NGE7 335 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 OR52E2Q8NGJ4 325 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 OR2A1Q8NGT9 310 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 KCNG3Q8TAE7 436 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 NUBPLQ8TB37 319 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 GPR151Q8TDV0 419 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 UBE2Q2Q8WVN8 375 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 CAPSLQ8WWF8 208 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 TMEM159Q96B96 161 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 ZFP3Q96NJ6 502 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SEC22CQ9BRL7 303 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 UQCC2Q9BRT2 126 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 SLIRPQ9GZT3 109 aaKnown RBP0.7□□□□□ -2.3
SRP54-207ENST00000555535 ANKRA2Q9H9E1 313 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 EXOSC4Q9NPD3 245 aaKnown RBP0.7□□□□□ -2.3
SRP54-207ENST00000555535 ETNK2Q9NVF9 386 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 RHBDL2Q9NX52 303 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PITPNC1Q9UKF7 332 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 NACADO15069 1562 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PALLDQ8WX93 1383 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 USP47Q96K76 1375 aa0.7□□□□□ -2.3
SRP54-207ENST00000555535 PCDH11XQ9BZA7 1347 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 IGHV1-69DA0A0B4J2H0 117 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 A0A0J9YXV3 536 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 CLRN2A0PK11 232 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 OR6C70A6NIJ9 312 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 GABRPO00591 440 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 SLC9A3R1O14745 358 aaPredicted RBP0.69□□□□□ -2.3
SRP54-207ENST00000555535 RNF13O43567 381 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 GLSO94925 669 aaPredicted RBP0.69□□□□□ -2.3
SRP54-207ENST00000555535 SEMA3DO95025 777 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 PAHP00439 452 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 CTSLP07711 333 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 THRAP10827 490 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 EIF2S2P20042 333 aaKnown RBP0.69□□□□□ -2.3
SRP54-207ENST00000555535 PRKACBP22694 351 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 GGT2P36268 569 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 POLR2IP36954 125 aaKnown RBP0.69□□□□□ -2.3
SRP54-207ENST00000555535 CRYBB2P43320 205 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 SP4Q02446 784 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 ART3Q13508 389 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 LUZP6Q538Z0 58 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 TEX30Q5JUR7 227 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 AVPI1Q5T686 147 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 PRAMEF20Q5VT98 475 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 REEP3Q6NUK4 255 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 MED27Q6P2C8 311 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 OPN5Q6U736 354 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 TMEM107Q6UX40 140 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 PPP1R42Q7Z4L9 355 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 NANOGNBQ7Z5D8 188 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 SLC22A9Q8IVM8 553 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 TEX9Q8N6V9 391 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 NPWQ8N729 165 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 C11orf72Q8NBR9 251 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 TRPV1Q8NER1 839 aa0.69□□□□□ -2.3
SRP54-207ENST00000555535 AKR7LQ8NHP1 331 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms