RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TVP23AA6NH52 213 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 EIF4E1BA6NMX2 242 aaKnown RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 A8MXE2 369 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF587BE7ETH6 402 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 LRRTM2O43300 516 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 XPNPEP2O43895 674 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 KRT33AO76009 404 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 TFP02787 698 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 HNRNPCP07910 306 aaKnown RBP eCLIP5.48□□□□□ -1.532e-8■□□□□ 9.5
SCFD1-212ENST00000554486 ADRA2AP08913 450 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 NPSP0C0P6 89 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 DBTP11182 482 aaKnown RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 PSKH1P11801 424 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 COX5AP20674 150 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 IGHV1-2P23083 117 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 LAP3P28838 519 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MPGP29372 298 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 CHRNB4P30926 498 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 OPRM1P35372 400 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 SLC15A1P46059 708 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 ARF1P84077 181 aaKnown RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 HSF2Q03933 536 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF91Q05481 1191 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MED21Q13503 144 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 BLMHQ13867 455 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 GGTLC2Q14390 218 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 STK11Q15831 433 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 KLHL12Q53G59 568 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 SLC35D3Q5M8T2 416 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 C9orf135Q5VTT2 229 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MEDAGQ5VYS4 303 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 OTPQ5XKR4 325 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 KRT80Q6KB66 452 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 DNM1P34Q6PK57 102 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 UGT2A3Q6UWM9 527 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 Q6ZT83 130 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 PRIMA1Q86XR5 153 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 GID4Q8IVV7 300 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 TIGD4Q8IY51 512 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 GABRG1Q8N1C3 465 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 UBE2J2Q8N2K1 259 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF433Q8N7K0 673 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 PROKR2Q8NFJ6 384 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 SLC26A10Q8NG04 563 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 C11orf40Q8WZ69 217 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 SGCDQ92629 289 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 HTRA1Q92743 480 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 NABP1Q96AH0 204 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 Q96MT0 163 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 RHNO1Q9BSD3 238 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 RBM24Q9BX46 236 aaKnown RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 PIGMQ9H3S5 423 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MARCH7Q9H992 704 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 AMBNQ9NP70 447 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 B3GAT2Q9NPZ5 323 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 PLCXD1Q9NUJ7 323 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 TMEM38BQ9NVV0 291 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 FKBP14Q9NWM8 211 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 HAO2Q9NYQ3 351 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MGAT4CQ9UBM8 478 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 UPB1Q9UBR1 384 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 WARS2Q9UGM6 360 aaKnown RBP5.48□□□□□ -1.53
SCFD1-212ENST00000554486 MOKQ9UQ07 419 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 HCFC1P51610 2035 aa5.48□□□□□ -1.53
SCFD1-212ENST00000554486 CADP27708 2225 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF99A8MXY4 864 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 EEF1E1-BLOC1S5C9J1V9 151 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 J3QRE1 110 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SLC1A7O00341 560 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 EEF1E1O43324 174 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SELENOFO60613 162 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 LYZL6O75951 148 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SEC14L2O76054 403 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 CCDC159P0C7I6 412 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 NR2C1P13056 603 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 B4GALT1P15291 398 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 CRHBPP24387 322 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 NAA10P41227 235 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 MTNR1AP48039 350 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 CENPAP49450 140 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ZNF84P51523 738 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ELLP55199 621 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 CXCR4P61073 352 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SUMO2P61956 95 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 CSNK2BP67870 215 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 MRPS34P82930 218 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 GLO1Q04760 184 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 TMED1Q13445 227 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ENDOGQ14249 297 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 TSC22D1Q15714 1073 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SGCAQ16586 387 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 MEP1BQ16820 701 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 PCK2Q16822 640 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 RBM48Q5RL73 367 aaKnown RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 KLHL24Q6TFL4 600 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 STAC2Q6ZMT1 411 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 SHFQ7M4L6 423 aa5.47□□□□□ -1.53
SCFD1-212ENST00000554486 ABHD12BQ7Z5M8 362 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-212ENST00000554486 LUZP2Q86TE4 346 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms