RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 APOC1P02654 83 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 CAPZA2P47755 286 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 DHODHQ02127 395 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 Q499Y3 187 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM255AQ5JRV8 349 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 SPINK14Q6IE38 97 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 PLXDC2Q6UX71 529 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 UNQ9370/PRO34162Q6UXP9 181 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 HSD17B13Q7Z5P4 300 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF679Q8IYX0 411 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 PAQR8Q8TEZ7 354 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 THOC3Q96J01 351 aaKnown RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ANGPTL4Q9BY76 406 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM9BQ9NQ34 198 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 RCE1Q9Y256 329 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 OR6C65A6NJZ3 312 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 MCRIP1C9JLW8 97 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TNFSF11O14788 317 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TRAF3IP2O43734 574 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 LMX1BO60663 402 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 KHDRBS3O75525 346 aaKnown RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TRAPPC6AO75865 159 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 NPR2P20594 1047 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 RBMS1P29558 406 aaKnown RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 STARP49675 285 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 EGR3Q06889 387 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ZP4Q12836 540 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ACER2Q5QJU3 275 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 STAC2Q6ZMT1 411 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 CDH26Q8IXH8 852 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 EIF4E3Q8N5X7 224 aaKnown RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 COMMD4Q9H0A8 199 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 PFDN2Q9UHV9 154 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 KCNK7Q9Y2U2 307 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 NCOA6Q14686 2063 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 A6NIZ1 184 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TNFSF15O95150 251 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF43P17038 809 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 CALCRP30988 508 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 RAP1BP61224 184 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 RAP1AP62834 184 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 PYHIN1Q6K0P9 492 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 FCRLAQ7L513 359 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TMPRSS12Q86WS5 348 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 TEX19Q8NA77 164 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 RPS4Y2Q8TD47 263 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 HES7Q9BYE0 225 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-212ENST00000554467 DEPPQ9NTK1 212 aa10.38□□□□□ -0.75
SHMT2-212ENST00000554467 PINLYPA6NC86 204 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 RAB13P51153 203 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 CLDN17P56750 224 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 DEFA5Q01523 94 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 SLC25A25Q6KCM7 469 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 OR52N5Q8NH56 324 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 POLR1DQ9Y2S0 133 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 PQLC2LA1A4F0 135 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 SMAD9O15198 467 aaKnown RBP10.37□□□□□ -0.75
SHMT2-212ENST00000554467 CYC1P08574 325 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 SLC2A1P11166 492 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 RIDAP52758 137 aaKnown RBP10.37□□□□□ -0.75
SHMT2-212ENST00000554467 FGL1Q08830 312 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 TGIF1Q15583 401 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 FGD2Q7Z6J4 655 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 LOXL4Q96JB6 756 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 PLA2G3Q9NZ20 509 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 KLK11Q9UBX7 282 aa10.37□□□□□ -0.75
SHMT2-212ENST00000554467 MEIS3P1A6NDR6 274 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 IFITM5A6NNB3 132 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 L7N2F9 121 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ATG12O94817 140 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 HPP00738 406 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 P04436 131 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 TMIGD3P0DMS9 266 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ANOS1P23352 680 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 GDNFP39905 211 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 CHAF1BQ13112 559 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 SSPNQ14714 243 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 LINC00696Q6ZRV3 163 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 TMPPEQ6ZT21 453 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF227Q86WZ6 799 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 CMTM4Q8IZR5 234 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 GTPBP8Q8N3Z3 284 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 OR5T2Q8NGG2 359 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 OR14L1PQ8NHC6 308 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 NANPQ8TBE9 248 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 SCARB1Q8WTV0 552 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 GSN-AS1Q9NRJ2 163 aa10.36□□□□□ -0.75
SHMT2-212ENST00000554467 MYEF2Q9P2K5 600 aaKnown RBP10.36□□□□□ -0.75
SHMT2-212ENST00000554467 V9GY05 133 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms