RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 IL20RAQ9UHF4 553 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 KCNG2Q9UJ96 466 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 B9D1Q9UPM9 204 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 POLR1DQ9Y2S0 133 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 AP4S1Q9Y587 144 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 INSIG2Q9Y5U4 225 aa5.56□□□□□ -1.52
SLIRP-203ENST00000554074 TRAPPC2LH3BP13 241 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 TNFRSF11BO00300 401 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DCTN6O00399 190 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 FKBP6O75344 327 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 PPP1R3DO95685 299 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 CST1P01037 141 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DBHP09172 617 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 WNT2P09544 360 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ACSM4P0C7M7 580 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 SELEP16581 610 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 FASP25445 335 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 GSSP48637 474 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ERFP50548 548 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 SPIBQ01892 262 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 PAX8Q06710 450 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 TSPAN31Q12999 210 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 HLXQ14774 488 aaPredicted RBP5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MICAQ29983 383 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 RSPO1Q2MKA7 263 aaPredicted RBP5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ESCO2Q56NI9 601 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ARMCX4Q5H9R4 360 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DMRTA1Q5VZB9 504 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 SLC18B1Q6NT16 456 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 C1orf94Q6P1W5 598 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 LEG1Q6P5S2 330 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 CD300LDQ6UXZ3 194 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DOK3Q7L591 496 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 JAZF1Q86VZ6 243 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 C1orf87Q8N0U7 546 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ZDHHC22Q8N966 263 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 OR52J3Q8NH60 311 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 GNPDA2Q8TDQ7 276 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ERGIC1Q969X5 290 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MEGF10Q96KG7 1140 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 NMNAT3Q96T66 252 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 GPA33Q99795 319 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 SLC6A7Q99884 636 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 ATF6BQ99941 703 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MRI1Q9BV20 369 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 HCAR1Q9BXC0 346 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DGCR6LQ9BY27 220 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 RERGLQ9H628 205 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MMP26Q9NRE1 261 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 DDX28Q9NUL7 540 aaKnown RBP5.55□□□□□ -1.52
SLIRP-203ENST00000554074 PTTG3PQ9NZH4 202 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MIOXQ9UGB7 285 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 OR5V1Q9UGF6 321 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 CYB5R1Q9UHQ9 305 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 NUP50Q9UKX7 468 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 NOP16Q9Y3C1 178 aaKnown RBP5.55□□□□□ -1.52
SLIRP-203ENST00000554074 LYVE1Q9Y5Y7 322 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 AUP1Q9Y679 476 aa5.55□□□□□ -1.52
SLIRP-203ENST00000554074 MGAM2Q2M2H8 2515 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PKD1L1Q8TDX9 2849 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR6C68A6NDL8 312 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CEACAM18A8MTB9 384 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CLDN34H7C241 214 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 GNGT2O14610 69 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 MLNRO43193 412 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR10H3O60404 316 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 DIRAS1O95057 198 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CCNB2O95067 398 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PTBP3O95758 552 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ANXA8P13928 327 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 HIST1H1CP16403 213 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OTX1P32242 354 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 GGT2P36268 569 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 SEC61A1P61619 476 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 UBA52P62987 128 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PAX2Q02962 417 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 FOXL1Q12952 345 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ATP6AP1Q15904 470 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 MEP1BQ16820 701 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF404Q494X3 552 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR2T2Q6IF00 324 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 LRRN1Q6UXK5 716 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 RBMS3Q6XE24 437 aaKnown RBP5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ZNF620Q6ZNG0 422 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 CFAP77Q6ZQR2 320 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 NLRC3Q7RTR2 1065 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR5AS1Q8N127 324 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 C3orf56Q8N813 242 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 ATG16L2Q8NAA4 619 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 PLPP7Q8NBV4 271 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR4C15Q8NGM1 316 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR2AJ1Q8NGZ0 328 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 OR4K13Q8NH42 304 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 SGMS2Q8NHU3 365 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 Q8TCH9 128 aa5.54□□□□□ -1.52
SLIRP-203ENST00000554074 DACT3Q96B18 629 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms