RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 SLC36A3Q495N2 470 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 CCDC92Q53HC0 331 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-210ENST00000553779 C16orf87Q6PH81 154 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 CORO6Q6QEF8 472 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 FBXW12Q6X9E4 464 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 DCDC5Q6ZRR9 648 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 TMPRSS11FQ6ZWK6 438 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 SCCPDHQ8NBX0 429 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 OR10S1Q8NGN2 331 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 UPRTQ96BW1 309 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 C1orf147Q96MC9 270 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-210ENST00000553779 COQ7Q99807 217 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 ADAT1Q9BUB4 502 aaKnown RBP8.29□□□□□ -1.08
ACTN1-210ENST00000553779 NUAK2Q9H093 628 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 ANKRD19PQ9H560 264 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 FN3KRPQ9HA64 309 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 UFSP2Q9NUQ7 469 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 ARMCX1Q9P291 453 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 ENPP4Q9Y6X5 453 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 A0A1B0GUS0 222 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 hCG_1807616A0A1W2PRN6 198 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 A6NLC8 198 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 IQCF6A8MYZ5 107 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 M0QZ24 198 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FFAR1O14842 300 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 PPP1R3DO95685 299 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 HLA-DPB1P04440 258 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 RPSAP08865 295 aaKnown RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 GGT2P36268 569 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 NUDT2P50583 147 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 PRSS12P56730 875 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ECH1Q13011 328 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 DEFB112Q30KQ8 113 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 PDLIM3Q53GG5 364 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FAM201AQ5SY85 155 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ZNF362Q5T0B9 420 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 METTL11BQ5VVY1 283 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 CD276Q5ZPR3 534 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FIP1L1Q6UN15 594 aaKnown RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 DPY19L2P2Q6ZN68 376 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 C9orf139Q6ZV77 190 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 CBLL1Q75N03 491 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 PGAP1Q75T13 922 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ASRGL1Q7L266 308 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FAM122BQ7Z309 247 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 LINC00346Q8IVM7 164 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FAM156AQ8NDB6 213 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 C19orf18Q8NEA5 215 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 TAF15Q92804 592 aaKnown RBP eCLIP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ITFG2Q969R8 447 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ERMAPQ96PL5 475 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ATF6BQ99941 703 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 IFT27Q9BW83 186 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 SLITRK2Q9H156 845 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 TMEM165Q9HC07 324 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 SRA1Q9HD15 236 aaKnown RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 VSX1Q9NZR4 365 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-210ENST00000553779 ERVK-18Q9QC07 812 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 V9GYQ6 96 aa8.28□□□□□ -1.08
ACTN1-210ENST00000553779 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
ACTN1-210ENST00000553779 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SRRM5B3KS81 715 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SLC22A2O15244 555 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 MLNRO43193 412 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 ADAM20O43506 726 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 FAM20BO75063 409 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TOX4O94842 621 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 PLATP00750 562 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 NCK1P16333 377 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 ZNF823P16415 610 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 FUT4P22083 530 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 CALB2P22676 271 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SLC6A6P31641 620 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 GSK3BP49841 420 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 NPY4RP50391 375 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TPTEP56180 551 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SPIBQ01892 262 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 MZT1Q08AG7 82 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TRAP1Q12931 704 aaKnown RBP8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TAF13Q15543 124 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 RUSC1-AS1Q66K80 236 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 PTCHD4Q6ZW05 846 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 LNX2Q8N448 690 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 KIR3DL3Q8N743 410 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
ACTN1-210ENST00000553779 RP9Q8TA86 221 aaKnown RBP8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 GATAD2BQ8WXI9 593 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SPTSSAQ969W0 71 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 SLCO4A1Q96BD0 722 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
ACTN1-210ENST00000553779 TSC22D3Q99576 134 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms