RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GPR6P46095 362 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 RPS5P46782 204 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 YAP1P46937 504 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 CDC34P49427 236 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 GNG10P50151 68 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 DUSP3P51452 185 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 UGT2B15P54855 530 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ATP5IP56385 69 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 SPCS3P61009 180 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 SKP1P63208 163 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 GLO1Q04760 184 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MERTKQ12866 999 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 TSPAN31Q12999 210 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PDIA2Q13087 525 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 ZBED5Q49AG3 693 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NADK2Q4G0N4 442 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CCDC58Q4VC31 144 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ACTBL2Q562R1 376 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 BEX5Q5H9J7 111 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 BRMS1LQ5PSV4 323 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PHYHD1Q5SRE7 291 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CCNJQ5T5M9 372 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MLIPQ5VWP3 458 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MFSD14CQ5VZR4 134 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 LRRC66Q68CR7 880 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 C4orf22Q6V702 233 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 IDO2Q6ZQW0 420 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NDUFAF7Q7L592 441 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PAGE2Q7Z2X7 111 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CDR2LQ86X02 465 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 GID4Q8IVV7 300 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NELFCDQ8IXH7 590 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 KATNAL2Q8IYT4 538 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 COMMD1Q8N668 190 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ASCC1Q8N9N2 400 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 MRGPRFQ96AM1 343 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 SLC41A3Q96GZ6 507 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ANKRD36BP1Q96IX9 119 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 OR10C1Q96KK4 312 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 RNF157Q96PX1 679 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 C11orf70Q9BRQ4 267 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 TMEM175Q9BSA9 504 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CHAC1Q9BUX1 264 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PARP12Q9H0J9 701 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 HDHD2Q9H0R4 259 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 VCX2Q9H322 139 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 OR51B5Q9H339 312 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 FBXO44Q9H4M3 255 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 AUNIPQ9H7T9 357 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 HMG20AQ9NP66 347 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 DIABLOQ9NR28 239 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ZNF355PQ9NSJ1 428 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 RHBDL2Q9NX52 303 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ZNF629Q9UEG4 869 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 CHRNA9Q9UGM1 479 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CLEC2DQ9UHP7 191 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CDH9Q9ULB4 789 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 SCML1Q9UN30 329 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ACOT9Q9Y305 439 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PLB1Q6P1J6 1458 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 SYNJ1O43426 1573 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 SETXQ7Z333 2677 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 COL6A3P12111 3177 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ZNF608Q9ULD9 1512 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 PTPRKQ15262 1439 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MAP3K5Q99683 1374 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TRAV39A0A0B4J263 110 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 TRAV25A0A0B4J276 109 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 A0A0B4J2A0 478 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 A0A1W2PP18 115 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 C7orf66A4D0T2 115 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RAB19A4D1S5 217 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ZNF233A6NK53 670 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ZNF98A6NK75 572 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SYCE1LA8MT33 242 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SUPT3HB4E1H0 165 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 F8VP50 259 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ITGB1BP1O14713 200 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SCAMP2O15127 329 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 ARPC3O15145 178 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 DENRO43583 198 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 SCN2BO60939 215 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 DIRAS1O95057 198 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 RPP14O95059 124 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 RAB3DO95716 219 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 DHFRP00374 187 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 ASS1P00966 412 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 GAPDHP04406 335 aaKnown RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 FABP1P07148 127 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CAPN1P07384 714 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 KRT7P08729 469 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SLC2A3P11169 496 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 NQO2P16083 231 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PRPS1L1P21108 318 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 PTNP21246 168 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 SERPINB1P30740 379 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 NAA10P41227 235 aaPredicted RBP1.65□□□□□ -2.15
VRK1-202ENST00000553683 SLC1A1P43005 524 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CYB561P49447 251 aa1.65□□□□□ -2.15
VRK1-202ENST00000553683 CSNK1EP49674 416 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms