RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 RLN2P04090 185 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TYMSP04818 313 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RPLP0P05388 317 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 CT45A6P0DMU7 189 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CT45A5P0DMU8 189 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CT45A7P0DMV0 189 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 HIST1H1EP10412 219 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 CALML3P27482 149 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 AMTP48728 403 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ERFP50548 548 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 HNRNPA3P51991 378 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 RPL19P84098 196 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 FCHO2Q0JRZ9 810 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ZNF154Q13106 437 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PTGR1Q14914 329 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TRAM1Q15629 374 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ZBED5Q49AG3 693 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CCDC58Q4VC31 144 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CT45A1Q5HYN5 189 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 VAX1Q5SQQ9 334 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 LGI3Q8N145 548 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 OR51D1Q8NGF3 324 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PRSS3P2Q8NHM4 247 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CT45A3Q8NHU0 189 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 C11orf45Q8TAV5 145 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TRUB1Q8WWH5 349 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 RASSF5Q8WWW0 418 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 DYNLL2Q96FJ2 89 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 POM121L2Q96KW2 1035 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CALN1Q9BXU9 219 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ELOVL5Q9NYP7 299 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 NYAP2Q9P242 653 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PAK5Q9P286 719 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SEC14L4Q9UDX3 406 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 BTNL2Q9UIR0 455 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SAMD4AQ9UPU9 718 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 HECW1Q76N89 1606 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 AGLP35573 1532 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SCAPERQ9BY12 1400 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TINCRA0A1B0GVN0 87 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 FAM166BA8MTA8 275 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SPRY3O43610 288 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 NDUFA2O43678 99 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 BUB3O43684 328 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 KLRC4O43908 158 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 MAGEC1O60732 1142 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 DCTN3O75935 186 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CRYAAP02489 173 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 HOXC4P09017 264 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 OR8U9P0C7N5 309 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SLC2A2P11168 524 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 PVRP15151 417 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 KCNE1P15382 129 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SDC1P18827 310 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TNFRSF1BP20333 461 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RPS12P25398 132 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 GDF1P27539 372 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 GLP1RP43220 463 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 NR4A2P43354 598 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ATP4BP51164 291 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 P2RY4P51582 365 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PEX3P56589 373 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RPS27AP62979 156 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 TGFBR3Q03167 851 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 IL18R1Q13478 541 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TFDP2Q14188 446 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CALCRLQ16602 461 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ZNF260Q3ZCT1 412 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 HES5Q5TA89 166 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RWDD4Q6NW29 188 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 DHRS4L2Q6PKH6 230 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 GDPD3Q7L5L3 318 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ISCA2Q86U28 154 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PHF13Q86YI8 300 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 TMEM199Q8N511 208 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TMEM35BQ8NCS4 154 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 OR4D10Q8NGI6 311 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 OR10X1Q8NGY0 326 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 OR8U1Q8NH10 309 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 OR52N1Q8NH53 320 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RPLP0P6Q8NHW5 317 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CMTM7Q96FZ5 175 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 SEC22AQ96IW7 307 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 TMEM56Q96MV1 263 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RBP7Q96R05 134 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 DDA1Q9BW61 102 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ELL3Q9HB65 397 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 RHOFQ9HBH0 211 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 IMPAD1Q9NX62 359 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 EHFQ9NZC4 300 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RALYQ9UKM9 306 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 NDRG2Q9UN36 371 aaKnown RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 ASF1AQ9Y294 204 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 GOLT1BQ9Y3E0 138 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 CKAP5Q14008 2032 aa3.46□□□□□ -1.86
USP44-208ENST00000552440 GOLGA3Q08378 1498 aa3.46□□□□□ -1.86
USP44-208ENST00000552440 IGLV3-22A0A075B6J6 115 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms