RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	CPT1C	Q8TCG5	803 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	ABHD3	Q8WU67	409 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	FCAMR	Q8WWV6	532 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	FBXO17	Q96EF6	278 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	SCMH1	Q96GD3	660 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	GPR84	Q9NQS5	396 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	KNTC1	P50748	2209 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	MYO7B	Q6PIF6	2116 aa		10.12	□□□□□ -0.79
RAB5C-208	ENST00000551338	FREM1	Q5H8C1	2179 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	AHCTF1	Q8WYP5	2266 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	TRAV6	A0A075B6T7	132 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	TRAV18	A0A075B6X5	111 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	IGKV3D-15	A0A087WSY6	115 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	NAP1L6	A6NFF2	107 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	CDK2AP1	O14519	115 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	GMDS	O60547	372 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ECD	O95905	644 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ITGB2	P05107	769 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	CST2	P09228	141 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ABO	P16442	354 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ZNF708	P17019	499 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ZNF20	P17024	532 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	GNAL	P38405	381 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	GUCA1A	P43080	201 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	CCR6	P51684	374 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	NKX2-5	P52952	324 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	SOX8	P57073	446 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	RAB25	P57735	213 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	RRAS2	P62070	204 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	GUCA2A	Q02747	115 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	CBX3	Q13185	183 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	RAB35	Q15286	201 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	HYAL4	Q2M3T9	481 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	RSPO1	Q2MKA7	263 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	BTN2A1	Q7KYR7	527 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	DOK3	Q7L591	496 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	LUZP2	Q86TE4	346 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	NAA40	Q86UY6	237 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	VASH2	Q86V25	355 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	PGAM5	Q96HS1	289 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	LYZL4	Q96KX0	146 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	SORCS2	Q96PQ0	1159 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	CACNG6	Q9BXT2	260 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	ATG5	Q9H1Y0	275 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	METTL17	Q9H7H0	456 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	NEK6	Q9HC98	313 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	TMEM138	Q9NPI0	162 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	DIABLO	Q9NR28	239 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	NUDT15	Q9NV35	164 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	FAM86C1	Q9NVL1	165 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	COPZ2	Q9P299	210 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	KLK11	Q9UBX7	282 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	POU2F3	Q9UKI9	436 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	SLC5A6	Q9Y289	635 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338	N6AMT1	Q9Y5N5	214 aa		10.11	□□□□□ -0.79
RAB5C-208	ENST00000551338		H7C417	338 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338		M0R135	149 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	ALDOB	P05062	364 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	RAB3A	P20336	220 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	RAB6A	P20340	208 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	SDHB	P21912	280 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	CRYGS	P22914	178 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	AP3S2	P59780	193 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	GALK2	Q01415	458 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	SNTB2	Q13425	540 aa	Known RBP	10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	KCNJ8	Q15842	424 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	CEACAM16	Q2WEN9	425 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	OR10K2	Q6IF99	312 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338		Q6ZSR3	168 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	RNF144B	Q7Z419	303 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	COMMD2	Q86X83	199 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	SLC22A24	Q8N4F4	322 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	PTX4	Q96A99	478 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	ZNF799	Q96GE5	643 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	DMRTB1	Q96MA1	342 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	FYTTD1	Q96QD9	318 aa	Known RBP	10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	FOXB1	Q99853	325 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	CNTD2	Q9H8S5	307 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	CRLF2	Q9HC73	371 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	GPR35	Q9HC97	309 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	RANGRF	Q9HD47	186 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	PLEK2	Q9NYT0	353 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	MTFP1	Q9UDX5	166 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	LIPG	Q9Y5X9	500 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338		V9GYS6	101 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	ZNF407	Q9C0G0	2248 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	COL6A3	P12111	3177 aa		10.1	□□□□□ -0.79
RAB5C-208	ENST00000551338	DNAJC13	O75165	2243 aa		10.09	□□□□□ -0.79
RAB5C-208	ENST00000551338	OTOGL	Q3ZCN5	2332 aa		10.09	□□□□□ -0.79
RAB5C-208	ENST00000551338		A0A0A6YYJ9	748 aa		10.09	□□□□□ -0.79
RAB5C-208	ENST00000551338		A0A0U1RQV5	110 aa		10.09	□□□□□ -0.79
RAB5C-208	ENST00000551338	WIPF3	A6NGB9	483 aa		10.09	□□□□□ -0.79
RAB5C-208	ENST00000551338		F5H5K5	113 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms