RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CD276Q5ZPR3 534 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 CGB2Q6NT52 195 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 C8orf82Q6P1X6 216 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-221ENST00000550914 SMARCD3Q6STE5 483 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 Q6YL49 198 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 JAZF1Q86VZ6 243 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 PLPP7Q8NBV4 271 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 SLC26A10Q8NG04 563 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 FAM71F1Q96KD3 344 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-221ENST00000550914 TRIM36Q9NQ86 728 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 NDUFAF4Q9P032 175 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 GMPR2Q9P2T1 348 aaKnown RBP10.7□□□□□ -0.7
PTCH1-221ENST00000550914 B9D1Q9UPM9 204 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 AURKCQ9UQB9 309 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 SOX21Q9Y651 276 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-221ENST00000550914 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
PTCH1-221ENST00000550914 MDFIC2A0A1B0GVS7 189 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 P2RY10O00398 339 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-221ENST00000550914 ARPC3O15145 178 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 NDUFA2O43678 99 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 PTBP3O95758 552 aaKnown RBP10.69□□□□□ -0.7
PTCH1-221ENST00000550914 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 CRYBA1P05813 215 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 OMGP23515 440 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
PTCH1-221ENST00000550914 RAG2P55895 527 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 MEP1BQ16820 701 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 FGD3Q5JSP0 725 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 CLEC12AQ5QGZ9 265 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 SLC18B1Q6NT16 456 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 CORO6Q6QEF8 472 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 BRD3OSQ6XYD6 125 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 HACD2Q6Y1H2 254 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 C17orf107Q6ZR85 190 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 ZBTB46Q86UZ6 589 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 OR6V1Q8N148 313 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 FAM162AQ96A26 154 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 DHRS1Q96LJ7 313 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 TSSK2Q96PF2 358 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 PITX2Q99697 317 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 ATF6BQ99941 703 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 WDR76Q9H967 626 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 ARGLU1Q9NWB6 273 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-221ENST00000550914 CYB5R1Q9UHQ9 305 aa10.69□□□□□ -0.7
PTCH1-221ENST00000550914 TRBV4-1A0A0J9YWV2 114 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 IGHV3-64DA0A0J9YX35 117 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 ZNF879B4DU55 563 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 C22orf46C9J442 243 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 GMDSO60547 372 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 FAM20BO75063 409 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 RENP00797 406 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 COX4I1P13073 169 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 CFHR2P36980 270 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 CENPAP49450 140 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
PTCH1-221ENST00000550914 MIDNQ504T8 468 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 OLFML2AQ68BL7 652 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 CFAP77Q6ZQR2 320 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 PGAP1Q75T13 922 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 OR2AJ1Q8NGZ0 328 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 SSMEM1Q8WWF3 244 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 TAF15Q92804 592 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTCH1-221ENST00000550914 C7orf34Q96L11 122 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 ERMAPQ96PL5 475 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-221ENST00000550914 CITED1Q99966 193 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 KCTD14Q9BQ13 255 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-221ENST00000550914 FUZQ9BT04 418 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 FN3KRPQ9HA64 309 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 EFCAB1Q9HAE3 211 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 C1RLQ9NZP8 487 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 ARMCX1Q9P291 453 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 ERVK-18Q9QC07 812 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 ABCD2Q9UBJ2 740 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 KCNG2Q9UJ96 466 aa10.68□□□□□ -0.7
PTCH1-221ENST00000550914 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 F5H5K5 113 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 LGALS8O00214 317 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 IDH3BO43837 385 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 LCATP04180 440 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 MELTFP08582 738 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 MMP9P14780 707 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 H2AFXP16104 143 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SLC6A6P31641 620 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 GGT2P36268 569 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 TPTEP56180 551 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SMIM11AP58511 58 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 RELBQ01201 579 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 KRT72Q14CN4 511 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 PDCD1Q15116 288 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 SEC23BQ15437 767 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 OR8G1Q15617 311 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 RFX4Q33E94 735 aa10.67□□□□□ -0.7
PTCH1-221ENST00000550914 FIP1L1Q6UN15 594 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms