RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SNAI3Q3KNW1 292 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 DRAM2Q6UX65 266 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 LRRN1Q6UXK5 716 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 COLCA1Q6ZS62 124 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
TROAP-213ENST00000550709 GID4Q8IVV7 300 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 BHLHE23Q8NDY6 225 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 UBASH3BQ8TF42 649 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 C18orf12Q96KH6 178 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 HRASLS5Q96KN8 279 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 ZNF582Q96NG8 517 aaPredicted RBP11.72□□□□□ -0.53
TROAP-213ENST00000550709 CNN2Q99439 309 aaKnown RBP11.72□□□□□ -0.53
TROAP-213ENST00000550709 SMR3AQ99954 134 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 BRD7Q9NPI1 651 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 GMPPBQ9Y5P6 360 aa11.72□□□□□ -0.53
TROAP-213ENST00000550709 TEP1Q99973 2627 aaKnown RBP11.72□□□□□ -0.53
TROAP-213ENST00000550709 ARFGEF3Q5TH69 2177 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 TBX1O43435 398 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 CDC14BO60729 498 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 INHBBP09529 407 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 CSF3P09919 207 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 ALOX5APP20292 161 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 KITLGP21583 273 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 COL8A2P25067 703 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 PEX2P28328 305 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 OTX1P32242 354 aaPredicted RBP11.71□□□□□ -0.53
TROAP-213ENST00000550709 GK2Q14410 553 aaPredicted RBP11.71□□□□□ -0.53
TROAP-213ENST00000550709 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 FAM57BQ71RH2 274 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.53
TROAP-213ENST00000550709 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 OR51G2Q8NGK0 314 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 OR2AE1Q8NHA4 323 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 COX4I2Q96KJ9 171 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
TROAP-213ENST00000550709 CYSLTR2Q9NS75 346 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 VPS13CQ709C8 3753 aa11.71□□□□□ -0.53
TROAP-213ENST00000550709 LOC390937A0A1W2PQ73 354 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 ENTPD6O75354 484 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 HTR1FP30939 366 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 ATP6V1E1P36543 226 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 LIPAP38571 399 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
TROAP-213ENST00000550709 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 ZMAT1Q5H9K5 638 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 Q6ZR03 302 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 USP51Q70EK9 711 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 PGAP1Q75T13 922 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 SLC35F2Q8IXU6 374 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 OR2Z1Q8NG97 314 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 TBX5Q99593 518 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 PIMREGQ9BSJ6 248 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 MYOZ1Q9NP98 299 aaPredicted RBP11.7□□□□□ -0.54
TROAP-213ENST00000550709 FAM118AQ9NWS6 357 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
TROAP-213ENST00000550709 IKZF2Q9UKS7 526 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
TROAP-213ENST00000550709 FLNAP21333 2647 aaKnown RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 LOC100130705A0A1B0GUX0 176 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 MAGEB4O15481 346 aaPredicted RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 LILRA1O75019 489 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 FOSL1P15407 271 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 SLC25A16P16260 332 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 ZNF92Q03936 586 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 ZNF786Q8N393 782 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 RFLNBQ8N5W9 214 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 TRUB1Q8WWH5 349 aaKnown RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 ASB17Q8WXJ9 295 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 RDH5Q92781 318 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 RFKQ969G6 155 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 YIPF5Q969M3 257 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 PGAM5Q96HS1 289 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 APOL4Q9BPW4 351 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 BPESC1Q9GZL8 116 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 SAP30LQ9HAJ7 183 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 SMPD3Q9NY59 655 aaPredicted RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 NKIRAS2Q9NYR9 191 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 TREM2Q9NZC2 230 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 NKX1-2Q9UD57 310 aaPredicted RBP11.69□□□□□ -0.54
TROAP-213ENST00000550709 LRP12Q9Y561 859 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 TMEM14AQ9Y6G1 99 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 CSPG4Q6UVK1 2322 aa11.69□□□□□ -0.54
TROAP-213ENST00000550709 MTORP42345 2549 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 IGHV3-64DA0A0J9YX35 117 aa11.68□□□□□ -0.54
TROAP-213ENST00000550709 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms