RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 Q8TCH9 128 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 FAM71F1Q96KD3 344 aaPredicted RBP19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 ATF6BQ99941 703 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 WDR76Q9H967 626 aa19.26■□□□□ 0.67
SMARCD1-209ENST00000550477 SRRM5B3KS81 715 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 MDKP21741 143 aaPredicted RBP19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 SLC6A6P31641 620 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 CD200P41217 278 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 FGF12P61328 243 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 DEFA6Q01524 100 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 MEP1BQ16820 701 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 COLCA1Q6ZS62 124 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 FITM2Q8N6M3 262 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 TSSK2Q96PF2 358 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 FN3KRPQ9HA64 309 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 NDUFAF4Q9P032 175 aa19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 GMPR2Q9P2T1 348 aaKnown RBP19.25■□□□□ 0.67
SMARCD1-209ENST00000550477 ACSM4P0C7M7 580 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 GK2Q14410 553 aaPredicted RBP19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 OR8G1Q15617 311 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 DEFB112Q30KQ8 113 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 RFX4Q33E94 735 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 GLYATQ6IB77 296 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 BRD3OSQ6XYD6 125 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 HACD2Q6Y1H2 254 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 MRPL21Q7Z2W9 205 aaKnown RBP19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 TMEM86BQ8N661 226 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 OR52J3Q8NH60 311 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 SPTSSAQ969W0 71 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 DACT3Q96B18 629 aaPredicted RBP19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 SLCO4A1Q96BD0 722 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 TECTBQ96PL2 329 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 MMADHCQ9H3L0 296 aaPredicted RBP19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 PRDM13Q9H4Q3 707 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 RNF7Q9UBF6 113 aa19.24■□□□□ 0.67
SMARCD1-209ENST00000550477 A0A1B0GWJ7 208 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 P2RY10O00398 339 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 ARPC3O15145 178 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 NDUFA2O43678 99 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 PPP1R3DO95685 299 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 NCK1P16333 377 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 OMGP23515 440 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 IFNGR2P38484 337 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 NUDT2P50583 147 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 MZT1Q08AG7 82 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 MAB21L1Q13394 359 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 PDLIM3Q53GG5 364 aaPredicted RBP19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 FAM201AQ5SY85 155 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 CGB2Q6NT52 195 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 OR6V1Q8N148 313 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 PNLDC1Q8NA58 520 aaKnown RBP19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 PLPP7Q8NBV4 271 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 FANK1Q8TC84 345 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 NMNAT3Q96T66 252 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 PCGF1Q9BSM1 259 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 IFT27Q9BW83 186 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 RPRD1BQ9NQG5 326 aaKnown RBP19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 UFSP2Q9NUQ7 469 aa19.23■□□□□ 0.67
SMARCD1-209ENST00000550477 IGLV1-36A0A0B4J1U3 117 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 FAM181BA6NEQ2 426 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 IDH3BO43837 385 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 GMDSO60547 372 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 ZNF823P16415 610 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 GGT2P36268 569 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 PMELP40967 661 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 TRAP1Q12931 704 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 SLC18B1Q6NT16 456 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 Q6YL49 198 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 LINC00346Q8IVM7 164 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 SLC26A10Q8NG04 563 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 OR4K13Q8NH42 304 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 NSRP1Q9H0G5 558 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 OR52D1Q9H346 318 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 KCNG2Q9UJ96 466 aa19.22■□□□□ 0.67
SMARCD1-209ENST00000550477 TRAV38-1A0A0B4J264 116 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TRBV4-1A0A0J9YWV2 114 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 MDFIC2A0A1B0GVS7 189 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 DCTN6O00399 190 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 FAM20BO75063 409 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TOX4O94842 621 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 GADD45GO95257 159 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 H2AFXP16104 143 aaPredicted RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 PSMB10P40306 273 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 RAG2P55895 527 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 FXYD6P3P58550 94 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 RSPO1Q2MKA7 263 aaPredicted RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 METTL11BQ5VVY1 283 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 FIP1L1Q6UN15 594 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 LYPD2Q6UXB3 125 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TSEN54Q7Z6J9 526 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 SPERTQ8NA61 448 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TBC1D15Q8TC07 691 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 GATAD2BQ8WXI9 593 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TNFRSF19Q9NS68 423 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 DCAF13Q9NV06 445 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 CYB5R1Q9UHQ9 305 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 TMCC3Q9ULS5 477 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 SOX21Q9Y651 276 aaPredicted RBP19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 POMT1Q9Y6A1 747 aa19.21■□□□□ 0.67
SMARCD1-209ENST00000550477 GGT3PA6NGU5 568 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms