RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 OR11L1Q8NGX0 322 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 UBE2FQ969M7 185 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 TPD52L3Q96J77 140 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 FNDC11Q9BVV2 318 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 HDHD2Q9H0R4 259 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 C16orf95Q9H693 158 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 NRIP3Q9NQ35 241 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 VSX1Q9NZR4 365 aaPredicted RBP8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 ERVK-18Q9QC07 812 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 TMCC3Q9ULS5 477 aa8.16□□□□□ -1.1
TRAFD1-207ENST00000550051 IGHV3-64DA0A0J9YX35 117 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 C5orf63A6NC05 138 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 FAM20BO75063 409 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SDHAP31040 664 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 BEND6Q5SZJ8 279 aaPredicted RBP8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 PGM2L1Q6PCE3 622 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 ZNF730Q6ZMV8 503 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 GDPGP1Q6ZNW5 385 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 BHLHE23Q8NDY6 225 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 LZICQ8WZA0 190 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 ZNF570Q96NI8 536 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SIKE1Q9BRV8 207 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 NDEL1Q9GZM8 345 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SLC22A4Q9H015 551 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 NUAK2Q9H093 628 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SIRPDQ9H106 197 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SYT4Q9H2B2 425 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 DPAGT1Q9H3H5 408 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 TCF7L1Q9HCS4 588 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 TRIM36Q9NQ86 728 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 RHCGQ9UBD6 479 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 RNF7Q9UBF6 113 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 CTSZQ9UBR2 303 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 SNX13Q9Y5W8 968 aa8.15□□□□□ -1.1
TRAFD1-207ENST00000550051 LGALS8O00214 317 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 GMDSO60547 372 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TSPAN9O75954 239 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 NDUFB2O95178 105 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TSPAN15O95858 294 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TXNDC12O95881 172 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 ECDO95905 644 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 IGHV4-59P01825 116 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 IFNW1P05000 195 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 ACSM4P0C7M7 580 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 YAP1P46937 504 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 COX10Q12887 443 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 ECH1Q13011 328 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 KRR1Q13601 381 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 GK2Q14410 553 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 MPPED2Q15777 294 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 METTL11BQ5VVY1 283 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 OTPQ5XKR4 325 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TBPL2Q6SJ96 375 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 ADCK1Q86TW2 530 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 C19orf18Q8NEA5 215 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 NPRL2Q8WTW4 380 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TECTBQ96PL2 329 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 GPX7Q96SL4 187 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 ANKRD19PQ9H560 264 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 RERGLQ9H628 205 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 CNTD2Q9H8S5 307 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 WDR76Q9H967 626 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 FN3KRPQ9HA64 309 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 MRGBPQ9NV56 204 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 SIGLEC7Q9Y286 467 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TMEM5Q9Y2B1 443 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 NOP16Q9Y3C1 178 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 LHFPL6Q9Y693 200 aa8.14□□□□□ -1.11
TRAFD1-207ENST00000550051 TRAV38-1A0A0B4J264 116 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 A0A0U1RQK1 487 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 ELOVL7A1L3X0 281 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 BBIP1A8MTZ0 92 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 FAM220BPB1ANY3 271 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 J3KTA2 159 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 IMPA2O14732 288 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 ADAM20O43506 726 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 PPP1R3DO95685 299 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 LHBP01229 141 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 CRABP1P29762 137 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 CDKN2AP42771 156 aaKnown RBP8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 GPR4P46093 362 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 MALLQ13021 153 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 LRRC23Q53EV4 343 aaPredicted RBP8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 KPRPQ5T749 579 aaPredicted RBP8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 HIST2H2BDQ6DRA6 164 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 METAP1DQ6UB28 335 aaPredicted RBP8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 DPY19L2P2Q6ZN68 376 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 Q6ZSV7 163 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 PTCHD4Q6ZW05 846 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 RRM2BQ7LG56 351 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 VTCN1Q7Z7D3 282 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 NAA40Q86UY6 237 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 C1QL4Q86Z23 238 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 OR2T12Q8NG77 320 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 DYDC1Q8WWB3 177 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 LRTOMTQ8WZ04 291 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 LHX4Q969G2 390 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
TRAFD1-207ENST00000550051 SMURF1Q9HCE7 757 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms