RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 RPS6KA3P51812 740 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 DEFA6Q01524 100 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 COX10Q12887 443 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 ECH1Q13011 328 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 KRTAP27-1Q3LI81 207 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 WDR25Q64LD2 544 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 C16orf89Q6UX73 402 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 HACD2Q6Y1H2 254 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 PTCHD4Q6ZW05 846 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 SPATC1Q76KD6 591 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 ARHGAP24Q8N264 748 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 OR10S1Q8NGN2 331 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 FAM46AQ96IP4 442 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 KRCC1Q9NPI7 259 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 RRP15Q9Y3B9 282 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 NOP16Q9Y3C1 178 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 IER3IP1Q9Y5U9 82 aa10.72□□□□□ -0.69
PTCH1-218ENST00000548945 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
PTCH1-218ENST00000548945 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 ANKRD65E5RJM6 399 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 SOCS2O14508 198 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 ENSAO43768 121 aaKnown RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 SERPINA1P01009 418 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 RHCEP18577 417 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 PSMB10P40306 273 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 PMELP40967 661 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 CD200P41217 278 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 CDKN2AP42771 156 aaKnown RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 OMPP47874 163 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 FXYD6P3P58550 94 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 KCNJ8Q15842 424 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 TSEN54Q7Z6J9 526 aaKnown RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 PGAM4Q8N0Y7 254 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 BHLHE23Q8NDY6 225 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 OR11L1Q8NGX0 322 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 MCUR1Q96AQ8 359 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 SLC22A4Q9H015 551 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 MMADHCQ9H3L0 296 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 BEX1Q9HBH7 125 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 KIF17Q9P2E2 1029 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 RPS6KA6Q9UK32 745 aa10.71□□□□□ -0.69
PTCH1-218ENST00000548945 FAM32AQ9Y421 112 aaKnown RBP10.71□□□□□ -0.69
PTCH1-218ENST00000548945 IGLV1-36A0A0B4J1U3 117 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 FAM181BA6NEQ2 426 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 DCTN6O00399 190 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 NME4O00746 187 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 IMPA2O14732 288 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 GSC2O15499 205 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 NDUFA7O95182 113 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 PPP1R3DO95685 299 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 KNG1P01042 644 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 LIPFP07098 398 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 ACSM4P0C7M7 580 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 GSK3BP49841 420 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 SLC7A2P52569 658 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 RAD23AP54725 363 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 FGF12P61328 243 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 MALLQ13021 153 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 GK2Q14410 553 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 SLC36A3Q495N2 470 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 OTPQ5XKR4 325 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 CD276Q5ZPR3 534 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 C8orf82Q6P1X6 216 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 SMARCD3Q6STE5 483 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 Q6YL49 198 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 JAZF1Q86VZ6 243 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 PLPP7Q8NBV4 271 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 SLC26A10Q8NG04 563 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 FAM71F1Q96KD3 344 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 CADM1Q9BY67 442 aaKnown RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 TRIM36Q9NQ86 728 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 NDUFAF4Q9P032 175 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 GMPR2Q9P2T1 348 aaKnown RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 PRPF19Q9UMS4 504 aaKnown RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 B9D1Q9UPM9 204 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 AURKCQ9UQB9 309 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 SOX21Q9Y651 276 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-218ENST00000548945 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
PTCH1-218ENST00000548945 MDFIC2A0A1B0GVS7 189 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 P2RY10O00398 339 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-218ENST00000548945 ARPC3O15145 178 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 NDUFA2O43678 99 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 PTBP3O95758 552 aaKnown RBP10.69□□□□□ -0.7
PTCH1-218ENST00000548945 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
PTCH1-218ENST00000548945 CRYBA1P05813 215 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms