RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 RPRD1BQ9NQG5 326 aaKnown RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 ZNF275Q9NSD4 429 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 C1RLQ9NZP8 487 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 ASH2LQ9UBL3 628 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 EIF3KQ9UBQ5 218 aaKnown RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 DNAJB9Q9UBS3 223 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 DUSP13Q9UII6 198 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 H3BSA7 217 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 RER1O15258 196 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 NGFP01138 241 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 LCKP06239 509 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 CCNOP22674 350 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TUBG1P23258 451 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-217ENST00000548420 SELENOVP59797 346 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TEKQ02763 1124 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 MEP1BQ16820 701 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TMEM255AQ5JRV8 349 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 UNQ6126/PRO20091Q6UXV3 157 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 ASRGL1Q7L266 308 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 SLC37A3Q8NCC5 494 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 GJC3Q8NFK1 279 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 OR2T33Q8NG76 320 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 OR4F5Q8NH21 305 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 ZNRF4Q8WWF5 429 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 NRBF2Q96F24 287 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 ELOVL3Q9HB03 270 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TUBG2Q9NRH3 451 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TBC1D23Q9NUY8 699 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.53
PTCH1-217ENST00000548420 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 PLEK2Q9NYT0 353 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 TAAR3PQ9P1P4 343 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 NUP50Q9UKX7 468 aa11.77□□□□□ -0.53
PTCH1-217ENST00000548420 GNGT2O14610 69 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 DOK2O60496 412 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 SOX14O95416 240 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 ERCC1P07992 297 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-217ENST00000548420 GGT2P36268 569 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 SLC25A1P53007 311 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 DOC2BQ14184 412 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 MAD2L1BPQ15013 274 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-217ENST00000548420 MOGQ16653 247 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 KRTAP27-1Q3LI81 207 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF718Q3SXZ3 478 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 SLC36A3Q495N2 470 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 ARL9Q6T311 187 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 RFPL4BQ6ZWI9 263 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 HS3ST5Q8IZT8 346 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 CYB561A3Q8NBI2 242 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 OR1F12Q8NHA8 337 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 SLC25A40Q8TBP6 338 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 KLF14Q8TD94 323 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-217ENST00000548420 COQ7Q99807 217 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 OR2J1Q9GZK6 312 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 OR51B6Q9H340 312 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 FN3KQ9H479 309 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 CMC2Q9NRP2 79 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 ARMC1Q9NVT9 282 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 NKIRAS2Q9NYR9 191 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 GPR160Q9UJ42 338 aa11.76□□□□□ -0.53
PTCH1-217ENST00000548420 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 ANXA8P13928 327 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 ANPEPP15144 967 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 PRKACGP22612 351 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 MPV17P39210 176 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 HTR5AP47898 357 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 MMP15P51511 669 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 PPP1CBP62140 327 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 MRPS11P82912 194 aaKnown RBP11.75□□□□□ -0.53
PTCH1-217ENST00000548420 CDK5Q00535 292 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 CRMP1Q14194 572 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 PCK2Q16822 640 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 OR2T4Q8NH00 348 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 ABHD4Q8TB40 342 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 SLC7A6Q92536 515 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 DCLRE1CQ96SD1 692 aaKnown RBP11.75□□□□□ -0.53
PTCH1-217ENST00000548420 PNRC2Q9NPJ4 139 aaKnown RBP11.75□□□□□ -0.53
PTCH1-217ENST00000548420 HINT3Q9NQE9 182 aaKnown RBP11.75□□□□□ -0.53
PTCH1-217ENST00000548420 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 KCNG2Q9UJ96 466 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 STARD10Q9Y365 291 aa11.75□□□□□ -0.53
PTCH1-217ENST00000548420 C5orf63A6NC05 138 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 J3QW42 95 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
PTCH1-217ENST00000548420 TIPRLO75663 272 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 RP2O75695 350 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 CLPXO76031 633 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 NDUFA7O95182 113 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 ABHD16AO95870 558 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 ADH4P08319 380 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms