RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MDP1Q86V88 176 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 VSTM4Q8IW00 320 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 CNTN4Q8IWV2 1026 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 NUP37Q8NFH4 326 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 OR4F15Q8NGB8 312 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 OR13C3Q8NGS6 347 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 PIGXQ8TBF5 258 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 ZNF675Q8TD23 568 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 MGARPQ8TDB4 240 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 DYRK2Q92630 601 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 CDS1Q92903 461 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 TRIM44Q96DX7 344 aaPredicted RBP3.41□□□□□ -1.86
CBX5-203ENST00000547872 CCDC126Q96EE4 140 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 TIMD4Q96H15 378 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 PDLIM5Q96HC4 596 aaKnown RBP3.41□□□□□ -1.86
CBX5-203ENST00000547872 OPRPNQ99935 248 aaPredicted RBP3.41□□□□□ -1.86
CBX5-203ENST00000547872 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 Q9N2K0 584 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 ZDHHC18Q9NUE0 388 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 PLCXD1Q9NUJ7 323 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 DCAF16Q9NXF7 216 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 TXNDC16Q9P2K2 825 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 OR5V1Q9UGF6 321 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 LEF1Q9UJU2 399 aaPredicted RBP3.41□□□□□ -1.86
CBX5-203ENST00000547872 GRID1Q9ULK0 1009 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 GUCA1BQ9UMX6 200 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 MMP24Q9Y5R2 645 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 U3KQK5 164 aa3.41□□□□□ -1.86
CBX5-203ENST00000547872 A0A087X002 238 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 ZNF816-ZNF321PA0A0X1KG74 233 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 C5orf63A6NC05 138 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 TRIM49D1C9J1S8 452 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 H0YIV9 168 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 TRAPPC2LH3BP13 241 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 CLDN34H7C241 214 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 OR7A17O14581 309 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 SCN2BO60939 215 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 UPK3AO75631 287 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 SEMA3DO95025 777 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 KCNK2O95069 426 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 AKR7A3O95154 331 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 HLA-HP01893 362 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 GPIP06744 558 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 MELTFP08582 738 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 OR8G3PP0DMU2 310 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 UROSP10746 265 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 THRBP10828 461 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 MLNP12872 115 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 CCL2P13500 99 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 STMN1P16949 149 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 MPIP34949 423 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 NKX2-1P43699 371 aaPredicted RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 TMEM33P57088 247 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 ATP6V0D1P61421 351 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 C2orf80Q0P641 193 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 FASTKD3Q14CZ7 662 aaKnown RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 RASA2Q15283 850 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 DUSP5Q16690 384 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 TRMT5Q32P41 509 aaKnown RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 CASC10Q5T4H9 136 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 KPRPQ5T749 579 aaPredicted RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 C4orf22Q6V702 233 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 TMPPEQ6ZT21 453 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 KRT77Q7Z794 578 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 KIRREL3Q8IZU9 778 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 METTL4Q8N3J2 472 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 THAP8Q8NA92 274 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 OR4F6Q8NGB9 312 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 GEMIN6Q8WXD5 167 aaKnown RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 RAB1CQ92928 201 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 CIDECQ96AQ7 238 aaPredicted RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 MOB3AQ96BX8 217 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 LINC00479Q96M42 142 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 RHOXF2Q9BQY4 288 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 THUMPD3Q9BV44 507 aaKnown RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 GLIPR2Q9H4G4 154 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 CTPS2Q9NRF8 586 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 STUB1Q9UNE7 303 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 EXOGQ9Y2C4 368 aaKnown RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 SLC9A8Q9Y2E8 581 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 TMED3Q9Y3Q3 217 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 POLR3HQ9Y535 204 aaPredicted RBP3.4□□□□□ -1.87
CBX5-203ENST00000547872 INSIG2Q9Y5U4 225 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 FLVCR1Q9Y5Y0 555 aa3.4□□□□□ -1.87
CBX5-203ENST00000547872 CADP27708 2225 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 IGHV3-64DA0A0J9YX35 117 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 LCE6AA0A183 80 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 A0A1W2PRD5 423 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 A0A1W2PRF3 423 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 A0A1W2PRM7 423 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 H3BNH8 94 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 PDLIM1O00151 329 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 GPR171O14626 319 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 CLPXO76031 633 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 NDUFA7O95182 113 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 IGHV2-70P01814 119 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 IGHMP01871 453 aa3.39□□□□□ -1.87
CBX5-203ENST00000547872 CCDC159P0C7I6 412 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms