RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 UBA52P62987 128 aaKnown RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 DEFA5Q01523 94 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 ANGPTL5Q86XS5 388 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 FAM219AQ8IW50 185 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 OR1M1Q8NGA1 313 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 ZC3H10Q96K80 434 aaKnown RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 SLC25A32Q9H2D1 315 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 CNTRLQ7Z7A1 2325 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 RTTNQ86VV8 2226 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 C13orf42A0A1B0GVH6 325 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 A0A1B0GX78 115 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 A6NIZ1 184 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 RAP1BP61224 184 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 HNRNPKP61978 463 aaKnown RBP eCLIP14.05□□□□□ -0.164e-6■■■■□ 21.9
LDLR-204ENST00000545707 RAP1AP62834 184 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 QRFPP83859 136 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 PCK2Q16822 640 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 OGFOD3Q6PK18 319 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 DNM1P34Q6PK57 102 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 OR2W3Q7Z3T1 314 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 OR10H5Q8NGA6 315 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 TMEM234Q8WY98 164 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 NARS2Q96I59 477 aaKnown RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 PRRT1Q99946 306 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 CHRNA10Q9GZZ6 450 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 LDAHQ9H6V9 325 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 BARX1Q9HBU1 254 aaPredicted RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 MYOZ1Q9NP98 299 aaPredicted RBP14.05□□□□□ -0.16
LDLR-204ENST00000545707 CHST11Q9NPF2 352 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 IFT46Q9NQC8 304 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 ZC4H2Q9NQZ6 224 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 PRR13Q9NZ81 148 aa14.05□□□□□ -0.16
LDLR-204ENST00000545707 A0A1W2PP11 408 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 SSX5O60225 188 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 PLATP00750 562 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 DAP3P51398 398 aaKnown RBP14.04□□□□□ -0.16
LDLR-204ENST00000545707 MMP16P51512 607 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 AKR1C2P52895 323 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 CLDN6P56747 220 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 AKR1C1Q04828 323 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 FGL1Q08830 312 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 RAB30Q15771 203 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 CARD17Q5XLA6 110 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 AWAT2Q6E213 333 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 ZNF101Q8IZC7 436 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 D2HGDHQ8N465 521 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 NKAIN3Q8N8D7 197 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 SLC38A9Q8NBW4 561 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 APCDD1LQ8NCL9 501 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 TMEM104Q8NE00 496 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 STT3BQ8TCJ2 826 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 MARCH1Q8TCQ1 289 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 EDAQ92838 391 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 A0A0A6YYH2 397 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 A6NJ64 397 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 BCL2L11O43521 198 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 NUDT21O43809 227 aaKnown RBP14.04□□□□□ -0.16
LDLR-204ENST00000545707 BCKDHBP21953 392 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 RIPPLY1Q0D2K3 151 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 MEF2DQ14814 521 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 GFOD2Q3B7J2 385 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 KLHL24Q6TFL4 600 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 TMPPEQ6ZT21 453 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 EIF4E3Q8N5X7 224 aaKnown RBP14.04□□□□□ -0.16
LDLR-204ENST00000545707 TMEM185AQ8NFB2 350 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 BPIFCQ8NFQ6 507 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 MFSD8Q8NHS3 518 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 RAB33BQ9H082 229 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 BANF2Q9H503 90 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 MBD2Q9UBB5 411 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 CA14Q9ULX7 337 aa14.04□□□□□ -0.16
LDLR-204ENST00000545707 ANKUB1A6NFN9 424 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 F5H0A9 414 aaPredicted RBP14.03□□□□□ -0.16
LDLR-204ENST00000545707 EFSO43281 561 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 RAB6AP20340 208 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 MOB3CQ70IA8 216 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 SLC22A24Q8N4F4 322 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 MITD1Q8WV92 249 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ROBO4Q8WZ75 1007 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ZNF501Q96CX3 271 aaPredicted RBP14.03□□□□□ -0.16
LDLR-204ENST00000545707 LRRC46Q96FV0 321 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 SLC7A5P2Q9GIP4 190 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 SERINC1Q9NRX5 453 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 CYB5R1Q9UHQ9 305 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 A0A0A6YYD4 124 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 A0A1W2PNR3 127 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 FAM74A7A6NL05 159 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 OR2F2O95006 317 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 CTRB1P17538 263 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 PI3P19957 117 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 HSD11B1P28845 292 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 CASRP41180 1078 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 C17orf67Q0P5P2 114 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 ZP4Q12836 540 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 OR2F1Q13607 317 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 FAM74A3Q4VXF1 159 aa14.03□□□□□ -0.16
LDLR-204ENST00000545707 CTRB2Q6GPI1 263 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms