RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ZNF205O95201 554 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 GASTP01350 101 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF12P17014 697 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 SRP9P49458 86 aaKnown RBP17.72■□□□□ 0.43
SCARB1-210ENST00000545493 ECH1Q13011 328 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF362Q5T0B9 420 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-210ENST00000545493 RASSF6Q6ZTQ3 369 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 MUC20Q8N307 709 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-210ENST00000545493 AQP11Q8NBQ7 271 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 PROKR2Q8NFJ6 384 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 OR51L1Q8NGJ5 315 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF799Q96GE5 643 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 CDADC1Q9BWV3 514 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 SUCNR1Q9BXA5 334 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 MAGIXQ9H6Y5 334 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 DDX28Q9NUL7 540 aaKnown RBP17.72■□□□□ 0.43
SCARB1-210ENST00000545493 TBC1D23Q9NUY8 699 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 COMMD3-BMI1R4GMX3 469 aa17.72■□□□□ 0.43
SCARB1-210ENST00000545493 IFNL4K9M1U5 179 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 PMELP40967 661 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 ZNF154Q13106 437 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 SNAI3Q3KNW1 292 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 BPIFB2Q8N4F0 458 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 LINC00471Q8N535 108 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 OR9Q1Q8NGQ5 310 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 OR4Q3Q8NH05 313 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 C22orf15Q8WYQ4 148 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 DVL3Q92997 716 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-210ENST00000545493 RBM4Q9BWF3 364 aaKnown RBP17.71■□□□□ 0.43
SCARB1-210ENST00000545493 HCAR1Q9BXC0 346 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 INSIG2Q9Y5U4 225 aa17.71■□□□□ 0.43
SCARB1-210ENST00000545493 B2RBV5 119 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 SOX14O95416 240 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 LCATP04180 440 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ZNF823P16415 610 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 OTX1P32242 354 aaPredicted RBP17.7■□□□□ 0.42
SCARB1-210ENST00000545493 GATA4P43694 442 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 RAD23AP54725 363 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ACTG1P63261 375 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 MAB21L1Q13394 359 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 CRMP1Q14194 572 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ZNF181Q2M3W8 571 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 TUSC1Q2TAM9 212 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ESCO2Q56NI9 601 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 KLF17Q5JT82 389 aaPredicted RBP17.7■□□□□ 0.42
SCARB1-210ENST00000545493 FAM201AQ5SY85 155 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 LNX2Q8N448 690 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ZDHHC22Q8N966 263 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 OR2T4Q8NH00 348 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 FAM216AQ8WUB2 273 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 POP5Q969H6 163 aaKnown RBP17.7■□□□□ 0.42
SCARB1-210ENST00000545493 SLCO4A1Q96BD0 722 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 MUC13Q9H3R2 512 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 TMEM165Q9HC07 324 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 TMEM100Q9NV29 134 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 ARMC1Q9NVT9 282 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 LRCH1Q9Y2L9 728 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 U3KQV3 271 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 NBEAL1Q6ZS30 2694 aa17.7■□□□□ 0.42
SCARB1-210ENST00000545493 C5orf63A6NC05 138 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 RPS2P15880 293 aaKnown RBP17.69■□□□□ 0.42
SCARB1-210ENST00000545493 CD200P41217 278 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 MNAT1P51948 309 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 TPTEP56180 551 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 MS4A2Q01362 244 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 ARMCX4Q5H9R4 360 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 PRAMEF6Q5VXH4 476 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 C12orf54Q6X4T0 127 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 PGAP1Q75T13 922 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 ARHGAP24Q8N264 748 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 OR2AE1Q8NHA4 323 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 CCT8L2Q96SF2 557 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 TSSK6Q9BXA6 273 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 DGCR6LQ9BY27 220 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 NMNAT2Q9BZQ4 307 aa17.69■□□□□ 0.42
SCARB1-210ENST00000545493 TRIM77I1YAP6 450 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 GYPBP06028 91 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 COMPP49747 757 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-210ENST00000545493 HOXA4Q00056 320 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-210ENST00000545493 PAX2Q02962 417 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 MALLQ13021 153 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 ZNF404Q494X3 552 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 DCXRQ7Z4W1 244 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 DHFR2Q86XF0 187 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 KLBQ86Z14 1044 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 Q8TCH9 128 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 SPTSSAQ969W0 71 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 DACT3Q96B18 629 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-210ENST00000545493 NSL1Q96IY1 281 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 JMJD8Q96S16 334 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 TMEM246Q9BRR3 403 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 OR5V1Q9UGF6 321 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 SAMHD1Q9Y3Z3 626 aaKnown RBP17.68■□□□□ 0.42
SCARB1-210ENST00000545493 AUP1Q9Y679 476 aa17.68■□□□□ 0.42
SCARB1-210ENST00000545493 SPARCP09486 303 aa17.67■□□□□ 0.42
SCARB1-210ENST00000545493 WNT2P09544 360 aa17.67■□□□□ 0.42
SCARB1-210ENST00000545493 CLUP10909 449 aa17.67■□□□□ 0.42
SCARB1-210ENST00000545493 SPI1P17947 270 aa17.67■□□□□ 0.42
SCARB1-210ENST00000545493 CALB2P22676 271 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms