RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 DCXRQ7Z4W1 244 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PARP8Q8N3A8 854 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 OR51F2Q8NH61 342 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 GTF3AQ92664 365 aaKnown RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 MAP6Q96JE9 813 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 INTS14Q96SY0 518 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 POFUT1Q9H488 388 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PAPOLBQ9NRJ5 636 aaKnown RBP10.02□□□□□ -0.81
HDAC4-216ENST00000544989 PTTG3PQ9NZH4 202 aa10.02□□□□□ -0.81
HDAC4-216ENST00000544989 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 TVP23AA6NH52 213 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 MSMBP08118 114 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 SPARCP09486 303 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 IGFBP5P24593 272 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 FASP25445 335 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 GSTT1P30711 240 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 OTX1P32242 354 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-216ENST00000544989 RAD23AP54725 363 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 ESRRGP62508 458 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 CDK5Q00535 292 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 MZT1Q08AG7 82 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 HLXQ14774 488 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-216ENST00000544989 RSPO1Q2MKA7 263 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM255AQ5JRV8 349 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 SLC35D3Q5M8T2 416 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 OR2T2Q6IF00 324 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 ACSM5Q6NUN0 579 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 MRPL21Q7Z2W9 205 aaKnown RBP10.01□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM179BQ7Z7N9 219 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 OR51L1Q8NGJ5 315 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 OR5K1Q8NHB7 308 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 ERGIC1Q969X5 290 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 OTULINQ96BN8 352 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 KCNJ15Q99712 375 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 SLC30A2Q9BRI3 323 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF665Q9H7R5 613 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 WDR76Q9H967 626 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 MARCH7Q9H992 704 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 SLC25A19Q9HC21 320 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM100Q9NV29 134 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 TMEFF2Q9UIK5 374 aaPredicted RBP10.01□□□□□ -0.81
HDAC4-216ENST00000544989 PPP1R3CQ9UQK1 317 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 WIPI2Q9Y4P8 454 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 AP4S1Q9Y587 144 aa10.01□□□□□ -0.81
HDAC4-216ENST00000544989 LRRC30A6NM36 301 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 XRCC2O43543 280 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 GYPBP06028 91 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 CFL1P23528 166 aaKnown RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 HSD11B1P28845 292 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 IL2RGP31785 369 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 LMO4P61968 165 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 MVKQ03426 396 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 GK2Q14410 553 aaPredicted RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 ATP6AP1Q15904 470 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 SNCBQ16143 134 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 CR1LQ2VPA4 569 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 FAHD1Q6P587 224 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 Q6ZR03 302 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 KLBQ86Z14 1044 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 ERI1Q8IV48 349 aaKnown RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 C10orf67Q8IYJ2 551 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 C1orf87Q8N0U7 546 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 OR5AS1Q8N127 324 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 MUC20Q8N307 709 aaPredicted RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 IQCF1Q8N6M8 205 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF283Q8N7M2 679 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF511Q8NB15 262 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 SPRYD4Q8WW59 207 aaPredicted RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 UTP4Q969X6 686 aaKnown RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM186Q96B77 213 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 SLCO4A1Q96BD0 722 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 SLAMF6Q96DU3 332 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 DUS3LQ96G46 650 aaKnown RBP10□□□□□ -0.81
HDAC4-216ENST00000544989 OR2V2Q96R30 315 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 GAL3ST1Q99999 423 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 OSBPL10Q9BXB5 764 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 NARFLQ9H6Q4 476 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 CENPMQ9NSP4 180 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM106BQ9NUM4 274 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 TREM2Q9NZC2 230 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 NPTNQ9Y639 398 aa10□□□□□ -0.81
HDAC4-216ENST00000544989 A0A1B0GWJ7 208 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 ISPDA4D126 451 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 G3V2T6 193 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 TIPRLO75663 272 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 FSTL3O95633 263 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 IGHV2-5P01817 119 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 PRKACGP22612 351 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 GATA3P23771 443 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 DDOSTP39656 456 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 CRISP1P54107 249 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 EIF2B1Q14232 305 aaKnown RBP9.99□□□□□ -0.81
HDAC4-216ENST00000544989 ZNF181Q2M3W8 571 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 TMEM155Q4W5P6 130 aa9.99□□□□□ -0.81
HDAC4-216ENST00000544989 AVPI1Q5T686 147 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms