RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CCDC54Q8NEL0 328 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 IL17RDQ8NFM7 739 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 OR52H1Q8NGJ2 320 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 LILRB4Q8NHJ6 448 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ZNF420Q8TAQ5 688 aaPredicted RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 HSD17B8Q92506 261 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 HTRA1Q92743 480 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 SMIM19Q96E16 107 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 OPALINQ96PE5 141 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 AMELYQ99218 206 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 TTTY10Q9BZA0 68 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 WNT5BQ9H1J7 359 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 PNRC2Q9NPJ4 139 aaKnown RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 NDUFB11Q9NX14 153 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 B3GNT2Q9NY97 397 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 FREM1Q5H8C1 2179 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ZNF701M0R085 212 aaPredicted RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 M0R135 149 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 RPP14O95059 124 aaKnown RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 HLA-DPB1P04440 258 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 SERPINA5P05154 406 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 UBCP0CG48 685 aaKnown RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 PSKH1P11801 424 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 CD36P16671 472 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 ZNF12P17014 697 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 GABRA5P31644 462 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 OTX1P32242 354 aaPredicted RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 PEX19P40855 299 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 CX3CR1P49238 355 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 GDI2P50395 445 aaKnown RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 TMBIM6P55061 237 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 TBC1D28Q2M2D7 210 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 BCL2L15Q5TBC7 163 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 TMEM244Q5VVB8 128 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 OTPQ5XKR4 325 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 DMKNQ6E0U4 476 aaPredicted RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 ZNF774Q6NX45 483 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 PAMR1Q6UXH9 720 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 SATL1Q86VE3 508 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 PHC2Q8IXK0 858 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 C1orf174Q8IYL3 243 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 ZNF676Q8N7Q3 588 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 RELL2Q8NC24 303 aaPredicted RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 OR10S1Q8NGN2 331 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 OR2G2Q8NGZ5 317 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 OR5AK2Q8NH90 309 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 CA5BP1Q8WTZ4 195 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 RAB2BQ8WUD1 216 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 RNASE6Q93091 150 aaKnown RBP8.28□□□□□ -1.08
YBX3-215ENST00000544504 ZNF799Q96GE5 643 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 DOK1Q99704 481 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 NGBQ9NPG2 151 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 SSR3Q9UNL2 185 aa8.28□□□□□ -1.08
YBX3-215ENST00000544504 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.08
YBX3-215ENST00000544504 PRR32B1ATL7 298 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 PSMD9O00233 223 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 GATBO75879 557 aaKnown RBP8.27□□□□□ -1.09
YBX3-215ENST00000544504 CRYGSP22914 178 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 TUBG1P23258 451 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 CFL1P23528 166 aaKnown RBP8.27□□□□□ -1.09
YBX3-215ENST00000544504 STOMP27105 288 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 MAPK3P27361 379 aaPredicted RBP8.27□□□□□ -1.09
YBX3-215ENST00000544504 UGT2B10P36537 528 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 LIPAP38571 399 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 SLC6A9P48067 706 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 PRKXP51817 358 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 SORDQ00796 357 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 GALK2Q01415 458 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 SLC3A1Q07837 685 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 PPA1Q15181 289 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 YIF1BQ5BJH7 314 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 MDP1Q86V88 176 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 CATSPERDQ86XM0 798 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 ANKRD13BQ86YJ7 626 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 LIX1LQ8IVB5 337 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 RPS4Y2Q8TD47 263 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 PHYHIPQ92561 330 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 GHSRQ92847 366 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 NINJ1Q92982 152 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 S100PBPQ96BU1 408 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 YIPF6Q96EC8 236 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 PGAM5Q96HS1 289 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 MDFIQ99750 246 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 ACTR6Q9GZN1 396 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 OR10A2Q9H208 303 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 RGCCQ9H4X1 137 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 CDH20Q9HBT6 801 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 DLL4Q9NR61 685 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 TUBG2Q9NRH3 451 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 ZNF224Q9NZL3 707 aa8.27□□□□□ -1.09
YBX3-215ENST00000544504 EIF3KQ9UBQ5 218 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms