RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ABCA1O95477 2261 aa13.81□□□□□ -0.2
CIT-212ENST00000543239 ZFHX3Q15911 3703 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 A8MV72 311 aaPredicted RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 IQCF6A8MYZ5 107 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 PPIHO43447 177 aaKnown RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 TNFAIP6P98066 277 aaPredicted RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 GK2Q14410 553 aaPredicted RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 TAF13Q15543 124 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 TRIP10Q15642 601 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 HFEQ30201 348 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 KLHL12Q53G59 568 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 OR2T2Q6IF00 324 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 Q6ZR03 302 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 OR8G5Q8NG78 346 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 RNF133Q8WVZ7 376 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 ZMYND19Q96E35 227 aaPredicted RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 ABHD6Q9BV23 337 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 SEMA6AQ9H2E6 1030 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 TOR3AQ9H497 397 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 IL19Q9UHD0 177 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 OAZ3Q9UMX2 235 aa13.8□□□□□ -0.2
CIT-212ENST00000543239 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
CIT-212ENST00000543239 LRP5LA4QPB2 252 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 ZAR1LA6NP61 321 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 CLDN25C9JDP6 229 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 MITFO75030 526 aaPredicted RBP13.79□□□□□ -0.2
CIT-212ENST00000543239 APOC1P02654 83 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 ZNF16P17020 682 aaPredicted RBP13.79□□□□□ -0.2
CIT-212ENST00000543239 TNFRSF1AP19438 455 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 IGFBP5P24593 272 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 RPS7P62081 194 aaKnown RBP13.79□□□□□ -0.2
CIT-212ENST00000543239 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 SLX4IPQ5VYV7 408 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 PGAP1Q75T13 922 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 OR2Z1Q8NG97 314 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 OR13G1Q8NGZ3 307 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 OTOSQ8NHW6 89 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 MSI2Q96DH6 328 aaKnown RBP13.79□□□□□ -0.2
CIT-212ENST00000543239 TMEM160Q9NX00 188 aa13.79□□□□□ -0.2
CIT-212ENST00000543239 TMEFF2Q9UIK5 374 aaPredicted RBP13.79□□□□□ -0.2
CIT-212ENST00000543239 A0A1B0GWJ7 208 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 H3BNX3 289 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 CRLF1O75462 422 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 PRKXP51817 358 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 APOFQ13790 326 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 LCN1P1Q5VSP4 162 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 C12orf73Q69YU5 71 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 FAM166AQ6J272 317 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 MRPL21Q7Z2W9 205 aaKnown RBP13.78□□□□□ -0.2
CIT-212ENST00000543239 OR5AS1Q8N127 324 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 BBS1Q8NFJ9 593 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 CLDND2Q8NHS1 167 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 TIMD4Q96H15 378 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
CIT-212ENST00000543239 CIB1Q99828 191 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 SLC30A2Q9BRI3 323 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 OPA3Q9H6K4 179 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 SP140LQ9H930 580 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 CACNG2Q9Y698 323 aa13.78□□□□□ -0.2
CIT-212ENST00000543239 LOC100289279A0A1B0GTE1 492 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 XRCC2O43543 280 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 PRKYO43930 277 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 SELENOFO60613 162 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 LYNP07948 512 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 HSD11B1P28845 292 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 EPHA2P29317 976 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 IL2RGP31785 369 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 OPRL1P41146 370 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 EFNB1P98172 346 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 SNAI3Q3KNW1 292 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 SPATC1Q76KD6 591 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 BHLHE23Q8NDY6 225 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 CCL17Q92583 94 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 RAB1CQ92928 201 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 TEAD3Q99594 435 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 PKP2Q99959 881 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 RBM4BQ9BQ04 359 aaKnown RBP13.77□□□□□ -0.21
CIT-212ENST00000543239 SOX7Q9BT81 388 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 REPIN1Q9BWE0 567 aaKnown RBP13.77□□□□□ -0.21
CIT-212ENST00000543239 GABARAPL3Q9BY60 117 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 WIPI2Q9Y4P8 454 aa13.77□□□□□ -0.21
CIT-212ENST00000543239 NAV3Q8IVL0 2385 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 TANC2Q9HCD6 1990 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 SAC3D1A6NKF1 404 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 LMX1BO60663 402 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
CIT-212ENST00000543239 CX3CR1P49238 355 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 NXNL2Q5VZ03 156 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 SLC16A9Q7RTY1 509 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 LINC01356Q8N9X3 169 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 TMEM163Q8TC26 289 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 ITLN1Q8WWA0 313 aa13.76□□□□□ -0.21
CIT-212ENST00000543239 OR2V2Q96R30 315 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms