RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TRAV27A0A087WT01 109 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 LOC102725191A0A1B0GVB3 256 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 A0A1W2PRG6 482 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 A1L4Q6 167 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 UNC119BA6NIH7 251 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF726A6NNF4 738 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 PRSS44E7EML9 344 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 E9PI62 339 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 CLOCKO15516 846 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 FCGR3BO75015 233 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 KRT33AO76009 404 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 HPRP00739 348 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 FCGR1AP12314 374 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 HLA-DOBP13765 273 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 POU2F1P14859 743 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 FASP25445 335 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 AQP2P41181 271 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 OMPP47874 163 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 CLDN17P56750 224 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 CLRN1P58418 232 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 PRPS1P60891 318 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 RPL18Q07020 188 aaKnown RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZP4Q12836 540 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 PPP1R8Q12972 351 aaKnown RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 MICAQ29983 383 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZBED5Q49AG3 693 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 DCAF12L2Q5VW00 463 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZFP1Q6P2D0 407 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 NIPAL3Q6P499 406 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 DEGS2Q6QHC5 323 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 TFAP2EQ6VUC0 442 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 BIVMQ86UB2 503 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 C1QL4Q86Z23 238 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 KLHL36Q8N4N3 616 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZIC4Q8N9L1 334 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 BPIFCQ8NFQ6 507 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 OR4C15Q8NGM1 316 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 OR51A7Q8NH64 312 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 GNPDA2Q8TDQ7 276 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 DUS3LQ96G46 650 aaKnown RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ZNF385AQ96PM9 386 aaKnown RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 TNFRSF13CQ96RJ3 184 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 BDH2Q9BUT1 245 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 KCNK15Q9H427 330 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 INIPQ9NRY2 104 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ARMC1Q9NVT9 282 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 ELOVL5Q9NYP7 299 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 B3GAT1Q9P2W7 334 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 PHF3Q92576 2039 aaKnown RBP4.46□□□□□ -1.69
CLIP1-217ENST00000543205 KIAA1549Q9HCM3 1950 aa4.46□□□□□ -1.69
CLIP1-217ENST00000543205 A0A0U1RQV5 110 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 BTBD17A6NE02 478 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 HELTA6NFD8 242 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 CBY3A6NI87 242 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 OR6C65A6NJZ3 312 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 MCIDASD6RGH6 385 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 WRBO00258 174 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 CDC42EP2O14613 210 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 KDM4BO94953 1096 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 CLDN1O95832 211 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 IGHV3-9P01782 118 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 TFP02787 698 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 OR8G3PP0DMU2 310 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 IGFBP2P18065 325 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 FPR3P25089 353 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 RPL4P36578 427 aaKnown RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 OR3A2P47893 321 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 SELENOPP49908 381 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 DAP3P51398 398 aaKnown RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 BIDP55957 195 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ATP6AP1Q15904 470 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 PHYHD1Q5SRE7 291 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 CARD17Q5XLA6 110 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 FBXW9Q5XUX1 488 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 DHRS7BQ6IAN0 325 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 C1orf94Q6P1W5 598 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ANKRD16Q6P6B7 361 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ZNF474Q6S9Z5 364 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 SLC35D2Q76EJ3 337 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 PRSS45Q7RTY3 260 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 HDDC2Q7Z4H3 204 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ABHD12BQ7Z5M8 362 aaPredicted RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 AQP11Q8NBQ7 271 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 OR10G2Q8NGC3 310 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 GIPC3Q8TF64 312 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 PYDC1Q8WXC3 89 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 STMN2Q93045 179 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 RNASE6Q93091 150 aaKnown RBP4.46□□□□□ -1.7
CLIP1-217ENST00000543205 RASD2Q96D21 266 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 TXNDC15Q96J42 360 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 CITED1Q99966 193 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 ENKD1Q9H0I2 346 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 SPACA1Q9HBV2 294 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 YAE1D1Q9NRH1 226 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 MED29Q9NX70 200 aa4.46□□□□□ -1.7
CLIP1-217ENST00000543205 VNN3Q9NY84 501 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms