RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RAB22AQ9UL26 194 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 TNFSF18Q9UNG2 199 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 GTF2A1LQ9UNN4 478 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 VSIG4Q9Y279 399 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 PLEKHA6Q9Y2H5 1048 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 SESN1Q9Y6P5 492 aa4.63□□□□□ -1.67
ATPAF1-212ENST00000542495 MUC6Q6W4X9 2439 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PCNX3Q9H6A9 2034 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ADAMTS20P59510 1910 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 IGLV3-12A0A075B6K2 115 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 IGKV1D-43A0A0B4J1Z2 117 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 LOC101059948A0A1B0GTJ6 334 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM269A0A1B0GVZ9 245 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 A0A1B0GX78 115 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 A0A1W2PNV4 684 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 METTL21EPA6NDL7 271 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR5H14A6NHG9 310 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 RHPN2P1A8MT19 583 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 DISC1C4P0D8 188 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 D6RAR5 112 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR2F2O95006 317 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CYB5AP00167 134 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 TTRP02766 147 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 RLN2P04090 185 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 UBBP0CG47 229 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 FOLR1P15328 257 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF823P16415 610 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF28P17035 718 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PRKACBP22694 351 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 NTF4P34130 210 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 GNALP38405 381 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 APOBEC1P41238 236 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ARL4DP49703 201 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR1D5P58170 312 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 NXPH1P58417 271 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 HNRNPKP61978 463 aaKnown RBP eCLIP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 RPS27AP62979 156 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 UBA52P62987 128 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 RNF4P78317 190 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 NHLH1Q02575 133 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 FMODQ06828 376 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 SPOCK1Q08629 439 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 FGL1Q08830 312 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 C17orf67Q0P5P2 114 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 UNC119Q13432 240 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR2F1Q13607 317 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 TRIM61Q5EBN2 209 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC25A53Q5H9E4 307 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PXDC1Q5TGL8 231 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR10K2Q6IF99 312 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 JMJD6Q6NYC1 403 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 FAHD2BQ6P2I3 314 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PAPD4Q6PIY7 484 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 LHFPL2Q6ZUX7 228 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 LANCL3Q6ZV70 420 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 MOB3CQ70IA8 216 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 H1FNTQ75WM6 255 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 COX15Q7KZN9 410 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF627Q7L945 461 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 KMT5CQ86Y97 462 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF248Q8NDW4 579 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 NFAM1Q8NET5 270 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 TSTD1Q8NFU3 115 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CADM4Q8NFZ8 388 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 OR1J2Q8NGS2 313 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 MITD1Q8WV92 249 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ST8SIA2Q92186 375 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF501Q96CX3 271 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 FAHD2AQ96GK7 314 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 NPAS1Q99742 590 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CMKLR1Q99788 373 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PRRX2Q99811 253 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 PRRT1Q99946 306 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 SPOCK3Q9BQ16 436 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 UQCC2Q9BRT2 126 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 MRPL13Q9BYD1 178 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 LDAHQ9H6V9 325 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CNTD2Q9H8S5 307 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 BARX1Q9HBU1 254 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CHST11Q9NPF2 352 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 SLC22A11Q9NSA0 550 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 CTSFQ9UBX1 484 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 ANAPC10Q9UM13 185 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 EXPH5Q8NEV8 1989 aa4.62□□□□□ -1.67
ATPAF1-212ENST00000542495 DNAH14Q0VDD8 3507 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 ELOA3CA0A087WX78 387 aaPredicted RBP4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 IGLV3-32A0A0A0MS00 114 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 RNF222A6NCQ9 220 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM235A6NFC5 223 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 LIPT2A6NK58 231 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 DBX1A6NMT0 343 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 TMEM14DPA8MWL7 114 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 NPIPA5E9PKD4 350 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 P2RY10O00398 339 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 ZNF354AO60765 605 aaPredicted RBP4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 SDC3O75056 442 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 PIAS2O75928 621 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 SCGNO76038 276 aa4.61□□□□□ -1.67
ATPAF1-212ENST00000542495 SCGB1D2O95969 90 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms